Job Description P0A825 Confidence 99.91% Date Thu Jan 5 11:06:42 GMT 2012 Rank 208 Aligned Residues 332 % Identity 15% Template c2zsmA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-2 aminomutase from aeropyrum pernix, hexagonal form Resolution 2.30 Å

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		26	.	.	.	30	.	.	.	.	.			.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure												.	.					.	.	.
Query SS confidence												.	.					.	.	.
Query Sequence		Q	E	E	H	I	E	L	I	A	S	.	.	E	N	Y	T	.	.	.	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q
Query Conservation												.	.					.	.	.
Alig confidence												.	.					.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	R	I	V	D	L	V	L	A	Y	G	P	L	I	L	G	H	K	H	P	R	V	L	E	A	V	E	E	A	L	A	R	G	W	L	Y	G	A	P	G	.	.	.	.	.	.	.	.	.	.	.	E	A	E	V	L	L	A	E	K	I	L	G	Y	V	K	R	G	G	M	I	R	F	V	N	S	G	T	E
Template Known Secondary structure								S	S	G	G	G	T	T		T	T		B	S													T	T		S			S	S			.	.	.	.	.	.	.	.	.	.	.	S															T	T							S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.												.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		101	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.														140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure								.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence								.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		A	N	F	A	V	Y	.	.	.	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	.
Query Conservation								.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence								.	.	.																							.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.											.
Template Conservation																																	.	.	.																													.	.	.	.	.	.	.
Template Sequence		A	T	M	T	A	I	R	L	A	R	G	Y	T	G	R	D	L	I	L	K	F	D	G	C	Y	H	G	S	H	D	A	.	.	.	V	L	V	A	A	G	G	V	P	T	S	A	G	V	P	E	A	V	A	R	L	T	L	V	T	P	Y	N	.	.	.	.	.	.	.	D	V	E	A	L	E	R	V	F	A	E
Template Known Secondary structure																								T					S	S	G	G	.	.	.	G	S								S	S	T	T							T	T						T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.
				164	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure		.	.											.										.	.	.	.																																					.
Query SS confidence		.	.											.										.	.	.	.																																					.
Query Sequence		.	.	E	H	K	P	K	M	I	I	G	G	.	F	S	A	Y	S	G	V	V	D	.	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	.	H	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R
Query Conservation		.	.											.										.	.	.	.																																					.
Alig confidence		.	.											.										.	.	.	.																																					.														.
Template Conservation																																																																														.
Template Sequence		Y	G	D	R	I	A	G	V	I	V	E	P	V	I	A	N	A	G	V	I	P	P	R	R	E	F	L	A	A	L	Q	R	L	S	R	E	S	G	A	L	L	I	L	D	E	V	V	T	G	F	R	L	G	L	E	G	A	Q	G	Y	F	N	I	E	G	D	I	I	V	L	G	K	I	I	G	G	.	G	F	P
Template Known Secondary structure			G	G	G								S	S	B		S	S	S		B																		T								T	T	T	T	T	T	S	S	T	T							T				S						G	G	G	G	T	.	T	S	S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		V	G	A	V	A	G	S	R	E	V	M	S	L	L	T	P	Q	G	K	V	F	N	A	G	T	F	N	A	H	P	I	T	M	A	A	G	L	A	T	L	K	A	L	E	E	E	P	V	Y	S	V	S	R	E	A	A	K	A	L	E	E	A	A	S	E	V	L	D	R	T	G	L	P	Y	T	I	N	R	V	.
Template Known Secondary structure													T	T	B	T	T	T	S	S	B					T	T	T	T																		S																						T	T	S	S									.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.													330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	H	L	F	L	V	D	L	V	D	K	N	L	T	.	.	.	.	.	.	.	.	.	.	.	.	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		E	S	M	M	Q	L	F	I	G	V	E	E	V	S	N	A	A	Q	A	R	K	A	D	K	K	F	Y	V	K	L	H	E	E	M	L	R	R	G	V	F	I	A	P	S	.	.	.	.	.	.	.	.	.	.	.	.	N	L	E	A	V	F	T	G	L	P	H	Q	.	.	.	.	G	E	A	L	E	I	A	V
Template Known Secondary structure		T	T							T		S			S	S					T	T	S															T	T					S	S	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S						T	T		S	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.													.	.	.	.	.	.	.	.	410	.	.	.					.	.	.	.	.	.	420	.
		384	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	M	C	D	V	L	D	S	I	N	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	L	R	S	S	L	K	T	V	L	G	S
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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