Job Description P0A825 Confidence 99.96% Date Thu Jan 5 11:06:42 GMT 2012 Rank 118 Aligned Residues 364 % Identity 15% Template c2zc0C_ PDB info PDB header:transferase Chain: C: PDB Molecule:alanine glyoxylate transaminase; PDBTitle: crystal structure of an archaeal alanine:glyoxylate aminotransferase Resolution 2.30 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.
Predicted Secondary structure																									.	.	.																																																				.	.
Query SS confidence																									.	.	.																																																				.	.
Query Sequence		E	L	W	Q	A	M	E	Q	E	K	V	R	Q	E	E	H	I	E	L	I	A	S	E	.	.	.	N	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	.	.	A
Query Conservation																									.	.	.																																																				.	.
Alig confidence																									.	.	.																				.	.	.	.																													.	.
Template Conservation																																															.	.	.	.
Template Sequence		D	V	M	K	K	A	S	E	L	Q	K	K	G	V	K	L	I	S	L	A	A	G	D	P	D	P	E	L	I	P	R	A	V	L	G	E	I	A	K	E	V	L	E	K	E	.	.	.	.	P	K	S	V	M	Y	T	P	A	N	G	I	P	E	L	R	E	E	L	A	A	F	L	K	K	Y	D	H	L	E	V
Template Known Secondary structure											T	T	S	S						S							T	T	T	S																	.	.	.	.	G	G	G	G	S				T	T																	S
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.
Predicted Secondary structure												.																																																																		.	.	.
Query SS confidence												.																																																																		.	.	.
Query Sequence		D	Y	A	N	V	Q	P	H	S	G	.	S	Q	A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	.	.	.	E
Query Conservation												.																																																																		.	.	.
Alig confidence												.																											.	.	.																																					.	.	.
Template Conservation																																							.	.	.
Template Sequence		S	P	E	N	I	V	I	T	I	G	G	T	G	A	L	D	L	L	G	R	V	L	I	D	P	G	D	V	V	I	T	E	N	P	S	Y	I	.	.	.	N	T	L	L	A	F	E	Q	L	G	A	K	I	E	G	V	P	V	D	N	D	G	M	R	V	D	L	L	E	E	K	I	K	E	L	K	A	K	G	Q
Template Known Secondary structure			G	G	G																					T	T								S				.	.	.								T	T	T										T	T																	T	T
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																																							.	.	.	.
Query SS confidence																	.	.	.	.	.																																							.	.	.	.
Query Sequence		H	K	P	K	M	I	I	G	G	F	S	A	Y	S	G	.	.	.	.	.	V	V	D	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	.	.	.	.	P	H	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R
Query Conservation																	.	.	.	.	.																																							.	.	.	.
Alig confidence																	.	.	.	.	.																																							.	.	.	.															.
Template Conservation																																																																														.
Template Sequence		K	V	K	L	I	Y	T	I	P	T	G	Q	N	P	M	G	V	T	M	S	M	E	R	R	K	A	L	L	E	I	A	S	K	Y	D	L	L	I	I	E	D	T	A	Y	N	F	M	R	Y	E	G	G	D	I	V	P	L	K	A	L	D	N	E	G	R	V	I	V	A	G	T	L	S	K	V	L	.	G	T	G
Template Known Secondary structure											S	S		T	T	T																				T								T	T	T	T		B	S	S		S	S				G	G	G	G		S	S									S					.		S	S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	I	G	W	I	I	A	E	G	E	I	L	K	K	V	L	M	Q	K	Q	P	I	D	F	C	A	P	A	I	S	Q	Y	I	A	L	E	Y	L	K	R	G	Y	F	E	K	Y	H	L	E	G	A	L	L	G	Y	K	E	K	R	D	I	M	L	K	A	L	E	N	H	L	P	N	A	E	F	T	K	P	I
Template Known Secondary structure		S																				T	T	T	T	S	S	S														T	T						T	T	T	T																					S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	.	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S
Query Conservation																								.
Alig confidence																								.																			.	.														.	.	.	.	.
Template Conservation																																											.	.														.	.	.	.	.
Template Sequence		A	G	M	F	V	M	F	F	L	P	E	G	A	D	G	I	S	F	A	N	E	L	M	E	R	E	G	V	V	V	V	P	G	K	P	F	Y	T	D	E	S	.	.	G	K	N	A	I	R	L	N	F	S	R	P	S	.	.	.	.	.	K	E	E	I	P	I	G	I	K	K	L	A	K	L	Y	K	E
Template Known Secondary structure		B	S	S							S	T	T													T	T					B			G	G	G		S	S	S		.	.		T	T							S	S	S		.	.	.	.	.	T	T															T
Template Predicted Secondary structure																																											.	.														.	.	.	.	.
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.						.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions