Job Description P0A825 Confidence 99.95% Date Thu Jan 5 11:06:42 GMT 2012 Rank 161 Aligned Residues 361 % Identity 13% Template c2x5fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate_tyrosine_phenylalanine pyridoxal-5' PDBTitle: crystal structure of the methicillin-resistant2 staphylococcus aureus sar2028, an3 aspartate_tyrosine_phenylalanine pyridoxal-5'-phosphate4 dependent aminotransferase Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.															.	.	.	30	.	.	.	.	.					.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.			.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.			.	.
Query Sequence		E	M	N	I	A	D	Y	D	A	E	L	W	Q	A	M	E	Q	E	K	V	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	H	I	E	L	I	A	S	.	.	.	.	E	N	.	.	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.			.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.			.	.												.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.
Template Sequence		N	E	Q	L	Q	Q	S	N	A	T	A	F	A	M	L	S	D	L	G	Q	N	M	F	Y	P	K	G	I	L	S	Q	S	A	E	A	K	S	T	T	Y	N	A	T	I	G	M	A	T	N	K	D	G	K	M	F	A	S	S	L	D	A	M	F	N	.	.	.	.	.	.	.	D	L	T	P	D	E	I	F	P
Template Known Secondary structure																												T									T	T	S	S	S					S	S				T	T										T	T		S	.	.	.	.	.	.	.	S			G	G	G	T	S	S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.															.
Query SS confidence																						.	.	.	.															.
Query Sequence		Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	.	.	.	.	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	.	S	Q	A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L
Query Conservation																						.	.	.	.															.
Alig confidence																						.	.	.	.															.																											.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		Y	A	P	P	Q	G	I	E	E	L	R	D	L	W	Q	Q	K	M	L	R	D	N	P	E	L	S	I	D	N	M	S	R	P	I	V	T	N	A	L	T	H	G	L	S	L	V	G	D	L	F	V	N	Q	D	D	T	I	L	L	P	E	H	N	W	G	.	.	.	N	Y	K	L	V	F	N	T	R	N	G	A
Template Known Secondary structure					T	T																		T	T			G	G	G	B							S																T	T							S	S			T	.	.	.							T	T	T	T
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.		.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.						.											.	.	.											.	.	.	.	.
Query SS confidence																														.	.	.						.											.	.	.											.	.	.	.	.
Query Sequence		Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	.	.	.	K	M	I	I	G	.	G	F	S	A	Y	S	G	V	V	D	.	.	.	W	A	K	M	R	E	I	A	D	S	.	.	.	.	.	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L
Query Conservation																														.	.	.						.											.	.	.											.	.	.	.	.
Alig confidence																														.	.	.						.											.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		N	L	Q	T	Y	P	I	F	D	K	D	G	H	Y	T	T	D	S	L	V	E	A	L	Q	S	Y	N	K	D	K	V	I	M	I	L	N	Y	P	N	N	P	T	G	Y	T	P	T	H	K	E	V	T	T	I	V	E	A	I	K	A	L	A	N	K	G	T	K	V	I	A	V	V	D	D	A	Y	Y	G	L	F
Template Known Secondary structure									B		T	T	S		B		S												S	S								S	S		T	T	T																						T	T										T	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220										.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.					.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.													.	.																											.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.													.	.																											.	.	.	.
Query Sequence		V	A	A	G	V	Y	P	N	P	V	P	H	A	.	.	.	.	.	.	.	.	.	H	V	V	T	T	T	T	H	K	T	L	A	.	.	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	.	.	.	.	G	G	Q	G	G	P	L	M	H	V	I	A	G	K
Query Conservation															.	.	.	.	.	.	.	.	.													.	.																											.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.													.	.																											.	.	.	.
Template Conservation
Template Sequence		Y	E	D	V	Y	T	Q	S	L	F	T	A	L	T	N	L	H	S	N	A	I	L	P	I	R	L	D	G	A	T	K	E	F	F	A	W	G	F	R	V	G	F	M	T	F	G	T	S	D	Q	T	T	K	E	V	L	E	A	K	V	K	G	L	I	R	S	N	I	S	S	G	P	L	P	T	Q	S	A	V	K
Template Known Secondary structure			S	S				S								T	T			T	T													T	T		G	G	G								B																				T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		273	.	.						.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.																																																															.
Query SS confidence					.	.	.	.	.																																																															.
Query Sequence		A	V	A	.	.	.	.	.	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	.	G	R	A	N	I	T	V	N	K
Query Conservation					.	.	.	.	.																																																															.
Alig confidence					.	.	.	.	.																																								.									.	.													.								.	.
Template Conservation																																																	.									.	.																					.	.
Template Sequence		H	V	L	K	N	N	K	Q	F	D	K	E	I	E	Q	N	I	Q	T	L	K	E	R	Y	E	V	T	K	E	V	V	Y	A	D	Q	Y	H	S	H	W	Q	A	Y	D	F	N	S	.	G	Y	F	M	A	I	K	V	.	.	H	D	V	D	P	E	A	L	R	K	H	L	I	D	K	Y	S	I	G	V	.	.
Template Known Secondary structure				T	T	T																											T		G	G	G	T	T	T								B	.	S	S							.	.	S	S	S													T					.	.
Template Predicted Secondary structure																																																	.									.	.																					.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S	I
Query Conservation
Alig confidence		.	.								.	.	.	.	.	.							.	.	.	.	.
Template Conservation		.	.								.	.	.	.	.	.							.	.	.	.	.
Template Sequence		.	.	I	A	L	N	A	T	D	.	.	.	.	.	.	I	R	I	A	F	S	.	.	.	.	.	C	V	E	K	D	D	I	P	H	V	F	D	S	I	A	K	A	I	D	D	L
Template Known Secondary structure		.	.				S	S	S		.	.	.	.	.	.					G	G	.	.	.	.	.	G	S		G	G	G
Template Predicted Secondary structure		.	.								.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
				394	.	.	.	.	.	400							.	.	.	.	.	.						.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.