Job Description P0A825 Confidence 99.97% Date Thu Jan 5 11:06:42 GMT 2012 Rank 97 Aligned Residues 355 % Identity 14% Template c2x5dD_ PDB info PDB header:transferase Chain: D: PDB Molecule:probable aminotransferase; PDBTitle: crystal structure of a probable aminotransferase from2 pseudomonas aeruginosa Resolution 2.25 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.																																																			.	.	.
Query SS confidence																											.	.																																																			.	.	.
Query Sequence		A	E	L	W	Q	A	M	E	Q	E	K	V	R	Q	E	E	H	I	E	L	I	A	S	E	N	.	.	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	.	.	.
Query Conservation																											.	.																																																			.	.	.
Alig confidence																											.	.															.	.	.	.	.	.																															.	.	.
Template Conservation																																											.	.	.	.	.	.
Template Sequence		N	I	T	A	E	L	K	M	A	A	R	R	R	G	E	D	I	I	D	L	S	M	G	N	P	D	G	P	T	P	P	H	I	V	E	K	L	C	T	V	A	.	.	.	.	.	.	Q	R	E	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	H	W	Y	R	D	R	Y	D	V	Q	I
Template Known Secondary structure															T							S						S															.	.	.	.	.	.		S	T	T			S				T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
			88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	D	Y	A	N	V	Q	P	H	S	G	S	Q	A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K
Query Conservation		.
Alig confidence		.																																						.	.	.
Template Conservation																																								.	.	.
Template Sequence		D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	L	D	H	G	D	T	I	L	V	P	N	P	S	Y	P	.	.	.	I	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	P	G	I	D	F	F	N	E	L	E	R	A	I	R	E	S	I	P	K	P
Template Known Secondary structure			T	T	T	S					S	S															T	T								S			T	.	.	.									T	T									S	T	T	S												T	S	S	S
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		167	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.								.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure										.									.	.	.																																								.	.	.	.	.	.	.
Query SS confidence										.									.	.	.																																								.	.	.	.	.	.	.
Query Sequence		P	K	M	I	I	G	G	F	.	S	A	Y	S	G	V	V	D	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	.	.	.	.	.	.	.	V	V	T	T	T	T	H	K	T	L	A	G	P	R
Query Conservation										.									.	.	.																																								.	.	.	.	.	.	.
Alig confidence										.									.	.	.																																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	M	M	I	L	G	F	P	S	N	P	T	A	Q	C	V	E	L	D	F	F	E	R	V	V	A	L	A	K	Q	Y	D	V	M	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	K	D	I	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R
Template Known Secondary structure		S						S	S		T	T	T																				T								T	T	T	T		B		T	T						G	G	G	S	T	T	G	G	G	T							S	T	T	T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D
Query Conservation
Alig confidence																					.	.	.	.	.																																																								.
Template Conservation																					.	.	.	.	.																																																								.
Template Sequence		I	G	F	M	V	G	N	P	E	L	V	S	A	L	A	R	I	K	S	.	.	.	.	.	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	Q	C	V	R	D	I	A	R	Q	Y	Q	Q	R	R	D	V	L	V	K	G	L	R	E	A	G	W	M	V	E	N	P	K	A	.
Template Known Secondary structure																					.	.	.	.	.	T	T		S	S	S													S	S																										T	T							S	B	.
Template Predicted Secondary structure																					.	.	.	.	.																																																								.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.						.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure													.	.												.
Query SS confidence													.	.												.
Query Sequence		N	H	L	F	L	V	D	L	V	D	K	.	.	N	L	T	G	K	E	A	D	A	A	L	.	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S
Query Conservation													.	.												.
Alig confidence													.	.												.								.	.	.	.																			.	.	.	.	.	.
Template Conservation																																		.	.	.	.																			.	.	.	.	.	.
Template Sequence		S	M	Y	V	W	A	K	I	P	E	P	Y	A	H	L	G	S	L	E	F	A	K	K	L	L	Q	D	A	K	V	S	V	.	.	.	.	S	P	G	I	G	F	G	D	Y	G	D	D	H	V	R	F	A	L	.	.	.	.	.	.	I	E	N	R	D	R	L	R	Q	A	V	R	G	I	K	A	M	F	R	A
Template Known Secondary structure		S	S												T	T																		.	.	.	.			G	G	G	G		G	G	G	T	T							.	.	.	.	.	.		S
Template Predicted Secondary structure																																		.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.							.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions