Job Description P0A825 Confidence 100.00% Date Thu Jan 5 11:06:42 GMT 2012 Rank 13 Aligned Residues 344 % Identity 19% Template c2w8wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: n100y spt with plp-ser Resolution 2.14 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		R	Q	E	E	H	I	E	L	I	A	S	E	N	Y	T	S	.	.	.	.	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q
Query Conservation																		.	.	.	.
Alig confidence										.								.	.	.	.												.																		.	.	.																				.
Template Conservation										.																							.																		.	.	.																				.
Template Sequence		R	G	K	D	T	I	L	L	.	G	T	Y	N	Y	M	G	M	T	F	D	P	D	V	I	A	A	G	K	E	A	L	.	E	K	F	G	S	G	T	Y	G	S	R	M	L	N	G	T	F	.	.	.	H	D	H	M	E	V	E	Q	A	L	R	D	F	Y	G	T	T	G	A	.	I	V	F	S	T	G	Y	M
Template Known Secondary structure		T	T							.	S				T	T		G	G	G													.					S				S	B	T	T	T	T	T			.	.	.															T		S			.				S
Template Predicted Secondary structure										.																							.																		.	.	.																				.
Template SS confidence
		63	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	.	S	A	Y	S	G
Query Conservation																																																																												.
Alig confidence																										.	.	.																				.	.	.																										.
Template Conservation																										.	.	.																				.	.	.
Template Sequence		A	N	L	G	I	I	S	T	L	A	G	K	G	E	Y	V	I	L	D	A	D	S	H	A	.	.	.	S	I	Y	D	G	C	Q	Q	G	N	A	E	I	V	R	F	R	H	N	.	.	.	S	V	E	D	L	D	K	R	L	G	R	L	P	K	E	P	A	K	L	V	V	L	E	G	V	Y	S	M	L	G	D
Template Known Secondary structure											S		T	T							T	T				.	.	.									S		S							T	T	.	.	.												S		S	S	S								S			T	T	T	T
Template Predicted Secondary structure																										.	.	.																				.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.
Query SS confidence																																					.	.	.	.	.
Query Sequence		V	V	D	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	.	.	.	.	.	N	P	V	P	H	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S
Query Conservation																																					.	.	.	.	.
Alig confidence																																					.	.	.	.	.																		.
Template Conservation																																																											.
Template Sequence		I	A	P	L	K	E	M	V	A	V	A	K	K	H	G	A	M	V	L	V	D	E	A	H	S	M	G	F	F	G	P	N	G	R	G	V	Y	E	A	Q	G	L	E	G	Q	I	D	F	V	V	G	T	F	S	K	S	V	.	G	T	V	G	G	F	V	V	S	N	H	P	K	F	E	A	V	R	L	A	C	R
Template Known Secondary structure															T	T								T	T	T	T	T	T	S	S	T	T	S							T	T		T	T	T		S						S	T	T	T	T	.		S	S									T	T	G	G	G
Template Predicted Secondary structure																																																											.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D
Query Conservation
Alig confidence																									.	.	.	.																																											.
Template Conservation																									.	.	.	.																																											.
Template Sequence		P	Y	I	F	T	A	S	L	P	P	S	V	V	A	T	A	T	T	S	I	R	K	L	.	.	.	.	M	T	A	H	E	K	R	E	R	L	W	S	N	A	R	A	L	H	G	G	L	K	A	M	G	F	R	L	G	T	E	T	C	D	S	A	I	V	A	V	M	L	.	E	D	Q	E	Q	A	A	M	M	W
Template Known Secondary structure					T	S	B																		.	.	.	.	T	T																						T	T				S		S	S			S	S							.	S	S
Template Predicted Secondary structure																									.	.	.	.																																											.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S	I
Query Conservation
Alig confidence																							.	.	.														.	.	.	.
Template Conservation																							.	.	.														.	.	.	.
Template Sequence		Q	A	L	L	D	G	G	L	Y	V	N	M	A	R	P	P	A	T	P	A	G	.	.	.	T	F	L	L	R	C	S	I	C	A	E	H	T	.	.	.	.	P	A	Q	I	Q	T	V	L	G	M	F	Q	A	A	G	R	A	V
Template Known Secondary structure							T	T								T	T	T	S		T	T	.	.	.										T	T			.	.	.	.
Template Predicted Secondary structure																							.	.	.														.	.	.	.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.				.	.	.	.	390	.	.	.	.	.	.	.	.					.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions