Return to main results Retrieve Phyre Job Id

Job DescriptionP0A825
Confidence55.38%DateThu Jan 5 11:06:42 GMT 2012
Rank352Aligned Residues174
% Identity9%Templatec2pp1C_
PDB info PDB header:lyaseChain: C: PDB Molecule:l-talarate/galactarate dehydratase; PDBTitle: crystal structure of l-talarate/galactarate dehydratase from2 salmonella typhimurium lt2 liganded with mg and l-lyxarohydroxamate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90. ..
Predicted Secondary structure 




























.
Query SS confidence 












































































.

Query Sequence  LWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYA. NV
Query Conservation            
    
 
    
  

 
  
        
           
               
 
 
    . 
Alig confidence 




....




















































.













.

Template Conservation 
  

....

    
  
 
                      

   




      

 . 
 


   
    
 
Template Sequence  LAKLL. . . . GAHRDSVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIR. RLTAVREALGDEFPLMV
Template Known Secondary structure  ....

S
S
TTS
TTS
TT





S
.
SSS
Template Predicted Secondary structure  ....





















.




Template SS confidence 















































































   151.... ....160.........170.........180.........190.........200........ .210.........220.....
 
   94.....100..... ....110.........120.........130.........140.........150.........160.........170..
Predicted Secondary structure 

.


































Query SS confidence 











.


































































Query Sequence  QPHSGSQANFAV. YTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIG
Query Conservation     


 
    .
 

  


 
           
        
                
 
 
          

  
Alig confidence 











.






































.....






















Template Conservation 


       
      
    
  



    
      
     



 
.....
           
   
 
    
Template Sequence  DANQQWDRETAIRMGRKMEQFNLIWIEEPLDAYDIEGHAQLAAALDTPIATG. . . . . EMLTSFREHEQLILGNASDFVQP
Template Known Secondary structure 
TT


GGG

S


S
TT

SS

.....TT

STT

S

Template Predicted Secondary structure 




















.....









Template SS confidence 















































































   226...230.........240.........250.........260.........270....... ..280.........290.........300
 
   173......180.........190........
Predicted Secondary structure 












Query SS confidence 

























Query Sequence  GFSAYSGVVDWAKMREIADSIGAYLF
Query Conservation    
  
   

  
  

   
  

Alig confidence 

























Template Conservation 
    



    

  
   

   
Template Sequence  DAPRVGGISPFLKIMDLAAKHGRKLA
Template Known Secondary structure 
TSTT

Template Predicted Secondary structure 









Template SS confidence 

























   301........310.........320......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions