Phyre 2 alignment of P0A825 with c2ordA

Job Description P0A825
Confidence 99.92% Date Thu Jan 5 11:06:42 GMT 2012

Rank 206 Aligned Residues 337

% Identity 15% Template c2ordA_

PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution

Resolution 1.40 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	26	.	.	.	30	.	.	.	.	.			.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure											.	.					.	.	.
Query SS confidence											.	.					.	.	.
Query Sequence	Q	E	E	H	I	E	L	I	A	S	.	.	E	N	Y	T	.	.	.	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q
Query Conservation											.	.					.	.	.
Alig confidence											.	.					.	.	.																									.	.	.	.	.	.	.	.	.																				.
Template Conservation																																												.	.	.	.	.	.	.	.	.																				.
Template Sequence	G	N	A	Y	L	D	F	T	S	G	I	A	V	N	V	L	G	H	S	H	P	R	L	V	E	A	I	K	D	Q	A	E	K	L	I	H	C	S	N	L	F	W	N	.	.	.	.	.	.	.	.	.	R	P	Q	X	E	L	A	E	L	L	S	K	N	T	F	G	G	K	V	.	F	F	A	N	T	G	T	E
Template Known Secondary structure							S	S					T		T	T		B	T																S				T	T	S			.	.	.	.	.	.	.	.	.													T	T	T	S				.				S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.																				.
Template SS confidence
	27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.										70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.

	101	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.																																		.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.																																		.	.	.	.	.
Query Sequence	A	N	F	A	V	Y	T	A	L	L	E	P	G	D	.	.	.	.	.	.	.	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	.	.	.	.	.	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K
Query Conservation															.	.	.	.	.	.	.																																		.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.												.	.																					.	.	.	.	.
Template Conservation																																	.	.
Template Sequence	A	N	E	A	A	I	K	I	A	R	K	Y	G	K	K	K	S	E	K	K	Y	R	I	L	S	A	H	N	S	F	H	G	.	.	R	T	L	G	S	L	T	A	T	G	Q	P	K	Y	Q	K	P	F	E	P	L	V	P	G	F	E	Y	F	E	F	N	N	V	E	D	L	R	R	K	X	S	E	D	V	C	A
Template Known Secondary structure																		T	T								B	T					.	.	S	S							S	B						G	G	G		S			T	T						T	T											T	T
Template Predicted Secondary structure																																	.	.
Template SS confidence
	97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

	169	170	.	.	.	.		.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure							.									.	.	.	.
Query SS confidence							.									.	.	.	.
Query Sequence	M	I	I	G	G	F	.	S	A	Y	S	G	V	V	D	.	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R	G	G	L	I	L	A	K	G
Query Conservation							.									.	.	.	.
Alig confidence							.									.	.	.	.
Template Conservation
Template Sequence	V	F	L	E	P	I	Q	G	E	S	G	I	V	P	A	T	K	E	F	L	E	E	A	R	K	L	C	D	E	Y	D	A	L	L	V	F	D	E	V	Q	C	G	X	G	R	T	G	K	L	F	A	Y	Q	K	Y	G	V	V	P	D	V	L	T	T	A	K	G	L	G	G	G	V	P	I	G	A	V	I	V	N
Template Known Secondary structure					S				T	T	T																				T								T	T	T	T	T	T	T	T	S	S	S	S						T				S						G	G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
	175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

	244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L
Query Conservation
Alig confidence		.	.	.																																																																				.
Template Conservation		.	.	.																																																																				.
Template Sequence	E	.	.	.	R	A	N	V	L	E	P	G	D	H	G	T	T	F	G	G	N	P	L	A	C	R	A	G	V	T	V	I	K	E	L	T	K	E	G	F	L	E	E	V	E	E	K	G	N	Y	L	X	K	K	L	Q	E	X	K	E	E	Y	D	V	V	A	D	V	R	G	X	.	G	L	X	I	G	I	Q	F
Template Known Secondary structure	S	.	.	.	T	T					T	T	S	S			S	S	T	T																T	S	T	T																								T	T								.	T	T
Template Predicted Secondary structure		.	.	.																																																																				.
Template SS confidence
	255				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330

	324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S	I
Query Conservation
Alig confidence	.																								.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation	.																								.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence	.	R	E	E	V	S	N	R	E	V	A	T	K	C	F	E	N	K	L	L	V	V	P	A	.	.	.	.	.	.	.	.	.	.	G	N	N	T	I	R	F	L	P	P	L	T	V	E	.	.	.	.	Y	G	E	I	D	L	A	V	E	T	L	K	K	V	L	Q	G	I
Template Known Secondary structure	.		T	T	S												T	T							.	.	.	.	.	.	.	.	.	.	T	T	T								T	T			.	.	.	.																	T
Template Predicted Secondary structure	.																								.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.											.	.	.	.	.	.	360	.	.	.	.	.	.	.					.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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