Job Description P0A825 Confidence 99.83% Date Thu Jan 5 11:06:42 GMT 2012 Rank 229 Aligned Residues 315 % Identity 15% Template c2cy8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:d-phenylglycine aminotransferase; PDBTitle: crystal structure of d-phenylglycine aminotransferase (d-phgat) from2 pseudomonas strutzeri st-201 Resolution 2.30 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		Q	E	E	H	I	E	L	I	A	S	E	N	Y	T	.	.	.	.	.	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	N	V	Y	L	D	F	F	G	G	H	G	A	L	V	L	G	H	G	H	P	R	V	N	A	A	I	A	E	A	L	S	H	G	V	Q	Y	A	A	S	H	.	.	.	.	.	.	.	.	.	.	.	P	L	E	V	R	W	A	E	R	I	V	A	A	F	P	S	I	R	K	L	R	F	T	G	S	G	T	E
Template Known Secondary structure								S		T	T	T	T	S		T	T		B	T													T	T	T		S	S		S	S		.	.	.	.	.	.	.	.	.	.	.															T	T		S						S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.												.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.			.	.
Predicted Secondary structure																																																																							.	.						.	.
Query SS confidence																																																																							.	.						.	.
Query Sequence		A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	.	.	I	I	G	G	F	.	.	S	A
Query Conservation																																																																							.	.						.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.																	.	.						.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Sequence		T	T	L	L	A	L	R	V	A	R	A	F	T	G	R	R	M	I	L	R	F	E	G	T	T	A	.	.	.	.	.	.	.	.	.	.	.	.	N	T	L	L	I	R	P	D	.	.	.	.	.	.	.	D	I	E	G	M	R	E	V	F	A	N	H	G	S	D	I	A	A	F	I	A	E	P	V	G	S	H
Template Known Secondary structure																										G	G	.	.	.	.	.	.	.	.	.	.	.	.	G						T	T	.	.	.	.	.	.	.													G	G	G								S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150													.	.	.	.	.	.	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		177	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure								.	.	.	.																																					.
Query SS confidence								.	.	.	.																																					.
Query Sequence		Y	S	G	V	V	D	.	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	.	H	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K
Query Conservation								.	.	.	.																																					.
Alig confidence								.	.	.	.																																					.												.																		.	.	.	.
Template Conservation																																																												.																		.	.	.	.
Template Sequence		F	G	V	T	P	V	S	D	S	F	L	R	E	G	A	E	L	A	R	Q	Y	G	A	L	F	I	L	D	E	V	I	S	G	F	R	V	G	N	H	G	M	Q	A	L	L	D	V	Q	P	D	L	T	C	L	A	K	A	S	.	A	G	G	L	P	G	G	I	L	G	G	R	E	D	V	M	G	.	.	.	.
Template Known Secondary structure				T																		T	T								T	T	T	T	T	T	T		T	T							T				S						G	G	G	.	G	T	T	S	S												T	.	.	.	.
Template Predicted Secondary structure																																																												.																		.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	V	L	S	R	G	S	F	T	G	N	P	I	T	A	A	A	A	I	A	A	I	D	T	I	L	E	D	D	V	C	A	K	I	N	D	L	G	Q	F	A	R	E	A	M	N	H	L	F	A	R	K	G	L	N	W	L	A	Y	G	R	F	S	G	F	H	L	M	P	G	L	P	P	N	T	T	D	T
Template Known Secondary structure		.	.	.	T	S	S	S																							T	T																							T	T									T	T							T	S		T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		332																		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S	I	N
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Sequence		G	S	I	T	R	A	E	V	A	R	P	D	V	K	M	I	A	A	M	R	M	A	L	I	L	E	G	V	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	R	G	S	V	F	L	S	A	Q	H	E	.	.	.	.	R	E	H	V	E	H	L	V	T	T	F	D	R	V	L	D	R	L	A
Template Known Secondary structure						T	T		S																		T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	T	T	T						T	T			.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.															.	.	.	.	.	410	.	.	.	.	.	.	.					.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		395	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		437	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions