Job Description P0A825 Confidence 99.81% Date Thu Jan 5 11:06:42 GMT 2012 Rank 234 Aligned Residues 349 % Identity 12% Template c2cjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:l-lysine-epsilon aminotransferase; PDBTitle: lysine aminotransferase from m. tuberculosis in external2 aldimine form Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.			.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure												.	.					.	.	.
Query SS confidence												.	.					.	.	.
Query Sequence		Q	E	E	H	I	E	L	I	A	S	.	.	E	N	Y	T	.	.	.	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q
Query Conservation												.	.					.	.	.
Alig confidence												.	.					.	.	.																																														.							.
Template Conservation																																																																		.							.
Template Sequence		G	R	R	Y	L	D	M	F	T	F	V	A	S	S	A	L	G	M	N	P	P	A	L	V	D	D	R	E	F	H	A	E	L	M	Q	A	A	L	N	K	P	S	N	S	D	V	Y	S	V	A	M	A	R	F	V	E	T	F	A	R	V	L	G	D	.	P	A	L	P	H	L	.	F	F	V	E	G	G	A	L
Template Known Secondary structure								S	S					T		S	S		B	S						T													T					T	T	T																				.	T	T					.				S	S
Template Predicted Secondary structure																																																																		.							.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.		.	.	.	.	.	.	.	130
		101	.	.	.	.	.	.	.	.	110	.															.	.	.	.	.	.	.	.	120	.	.	.	.	.	.										.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.																												.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.																												.	.	.	.
Query Sequence		A	N	F	A	V	Y	T	A	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	.	.	.	.	.	.	.	.	.	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.																												.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation
Template Sequence		A	V	E	N	A	L	K	A	A	F	D	W	K	S	R	H	N	Q	A	H	G	I	D	P	A	L	G	T	Q	V	L	H	L	R	G	A	F	H	G	R	S	G	Y	T	L	S	L	T	N	T	K	P	T	I	T	A	R	F	P	K	F	D	W	P	R	I	D	A	P	Y	M	R	P	G	L	D	E	P	A	M
Template Known Secondary structure																					T	T	S		T	T									T	T					S	S	T	T	G	G	G	T			S						T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
								154	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.											.	.												.	.									.	.	.	.																							.
Query SS confidence		.	.	.	.	.	.											.	.												.	.									.	.	.	.																							.
Query Sequence		.	.	.	.	.	.	D	Y	A	D	L	E	K	Q	A	K	.	.	E	H	K	P	K	M	I	I	G	G	F	.	.	S	A	Y	S	G	V	V	D	.	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	.	A	G	L	V	A	A	G	V	Y	P	N	P	V	P
Query Conservation		.	.	.	.	.	.											.	.												.	.									.	.	.	.																							.
Alig confidence		.	.	.	.	.	.											.	.												.	.									.	.	.	.																							.
Template Conservation
Template Sequence		A	A	L	E	A	E	A	L	R	Q	A	R	A	A	F	E	T	R	P	H	D	I	A	C	F	V	A	E	P	I	Q	G	E	G	G	D	R	H	F	R	P	E	F	F	A	A	M	R	E	L	C	D	E	F	D	A	L	L	I	F	D	E	V	Q	T	G	C	G	L	T	G	T	A	W	A	Y	Q	Q	L	D
Template Known Secondary structure																			S	T	T	T								S			S	T	T	T																			T	T								T	T	T	T	T	T	T	T	S	S	S	S	T					T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
			219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	H	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A
Query Conservation		.
Alig confidence		.									.	.				.
Template Conservation											.	.				.
Template Sequence		V	A	P	D	I	V	A	F	G	.	.	K	K	T	.	Q	V	C	G	V	M	A	G	R	R	V	D	E	V	A	D	N	V	F	A	V	P	S	R	L	N	S	T	W	G	G	N	L	T	D	M	V	R	A	R	R	I	L	E	V	I	E	A	E	G	L	F	E	R	A	V	Q	H	G	K	Y	L	R	A	R
Template Known Secondary structure					S						.	.	G	G	G	.	S	S							G	G	G	G	G	S	T	T		T	T	T	S	T	T	S	S			S	S	S	S																			T
Template Predicted Secondary structure											.	.				.
Template SS confidence
		291	.	.	.	.	.	.	.	.			300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A
Query Conservation
Alig confidence																												.																								.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																												.																								.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		L	D	E	L	A	A	D	F	P	A	V	V	L	D	P	R	G	R	G	L	M	C	A	F	S	L	.	P	T	T	A	D	R	D	E	L	I	R	Q	L	W	Q	R	A	V	I	V	L	P	A	.	.	.	.	.	.	.	.	.	.	G	A	D	T	V	R	F	R	P	P	L	T	V	S	.	.	.	.	T	A
Template Known Secondary structure									S	T	T	T	S							T	T							.	S	S														T	T							.	.	.	.	.	.	.	.	.	.	T	T	T								T	T			.	.	.	.
Template Predicted Secondary structure																												.																								.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.											.	.	.	420	.	.	.	.	.	.	.	.	.	430					.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	K	E	L	A	G	W	M	C	D	V	L	D	S	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	D	A	A	I	A	A	V	R	S	A	L	P	V	V	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions