Job Description P0A825 Confidence 99.95% Date Thu Jan 5 11:06:42 GMT 2012 Rank 153 Aligned Residues 298 % Identity 18% Template c2cb1A_ PDB info PDB header:lyase Chain: A: PDB Molecule:o-acetyl homoserine sulfhydrylase; PDBTitle: crystal structure of o-actetyl homoserine sulfhydrylase2 from thermus thermophilus hb8,oah2. Resolution 2.0 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q	A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	.	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I
Query Conservation																																																												.
Alig confidence																			.																																									.													.	.	.	.	.	.	.	.
Template Conservation																			.																																																						.	.	.	.	.	.	.	.
Template Sequence		A	K	A	L	E	E	R	L	K	A	L	E	G	A	L	E	A	.	V	V	L	A	S	G	Q	A	A	T	F	A	A	L	L	A	L	L	R	P	G	D	E	V	V	A	A	K	G	L	F	G	Q	T	I	G	L	F	G	Q	V	L	S	L	M	G	V	T	V	R	Y	V	D	.	.	.	.	.	.	.	.	P
Template Known Secondary structure														T		S			.				S	S											T	T			T	T							T	T												T	T	T	T	T	T								.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																			.																																																						.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.									.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	.	S	A	Y	S	G	V	V	D	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	V	V	T	T	T	T	H	K	T	L	A
Query Conservation																							.
Alig confidence																							.																																										.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		E	P	E	A	V	R	E	A	L	S	A	K	T	R	A	V	F	V	E	T	V	A	N	P	A	L	L	V	P	D	L	E	A	L	A	T	L	A	E	E	A	G	V	A	L	V	V	D	N	T	F	G	A	A	G	A	L	C	R	P	L	A	W	.	.	.	G	A	H	V	V	V	E	S	L	T	W	A	S	G
Template Known Secondary structure		S										T	T								S	S		T	T	T																	T								G	G	G	T	T	T	T	S			G	G	G	G	.	.	.	T		S										S
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.
		233	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.													.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	R	G	.	.	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	.	.	.	.	.	.	.	.	.	.	.	.	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M
Query Conservation						.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	S	V	L	G	G	A	V	L	S	R	E	T	E	L	W	R	N	Y	P	Q	F	L	Q	P	W	E	A	L	R	A	R	C	F	P	E	R	V	R	T	L	G	L	S	L	C	G	M	A	L	S	P	F	N	A	Y	L	L	F	Q	G	L	E	T	V	A	L	R	V	A	R	M	S	E	T	A	R	F	L
Template Known Secondary structure		S	S													S	G	G	G	G	S	G	G	G	G							G	G	G											T	T	T	T																G	G	G
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		299	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.												.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.									.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure										.	.													.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence										.	.													.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		V	E	V	F	L	E	R	G	.	.	Y	K	V	V	S	G	G	T	D	N	H	L	.	.	.	.	.	.	.	.	.	.	.	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	.	.	.	.	.	.	.	.	N	S	V	P	N	D	P	K	S	P	F
Query Conservation										.	.													.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Alig confidence										.	.													.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	R	L	Q	G	H	P	K	V	K	A	L	R	Y	P	G	L	P	E	D	P	A	H	R	N	A	R	K	Y	L	A	S	G	G	P	I	L	T	L	D	L	G	D	L	E	R	A	S	R	F	L	G	A	I	R	L	L	K	A	A	N	L	G	D	A	R	T	L	L	V	H	P	W	T	T	T	H	S	R
Template Known Secondary structure							T		T	T		S					T	T	S	T	T		T	T									S	S	S		S							S	S												S	S				S			S		S	S						T	T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		358												.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	.	.	.	.	.	.	.	.	.	.	.	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S
Query Conservation			.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.
Template Sequence		L	K	E	E	A	R	L	Q	A	G	V	T	P	G	L	V	R	V	S	V	G	L	.	.	.	.	.	.	.	.	E	D	P	L	D	L	L	A	L	F	E	E	A	L	E	A
Template Known Secondary structure		S								T	T			T	T								S	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.									.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions