Job Description P0A825 Confidence 99.93% Date Thu Jan 5 11:06:42 GMT 2012 Rank 193 Aligned Residues 327 % Identity 15% Template c1oatB_ PDB info PDB header:aminotransferase Chain: B: PDB Molecule:ornithine aminotransferase; PDBTitle: ornithine aminotransferase Resolution 2.50 Å

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		26	.	.	.	30	.	.	.	.	.			.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure												.	.						.	.	.
Query SS confidence												.	.						.	.	.
Query Sequence		Q	E	E	H	I	E	L	I	A	S	.	.	E	N	Y	T	S	.	.	.	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q
Query Conservation												.	.						.	.	.
Alig confidence												.	.						.	.	.												.																		.	.	.	.	.	.	.	.															.
Template Conservation																																	.																		.	.	.	.	.	.	.	.															.
Template Sequence		G	R	K	Y	F	D	F	L	S	S	Y	S	A	V	N	Q	G	H	C	H	P	K	I	V	N	A	L	K	S	Q	V	.	D	K	L	T	L	T	S	R	A	F	Y	N	N	V	L	G	E	.	.	.	.	.	.	.	.	Y	E	E	Y	I	T	K	L	F	N	Y	H	K	V	.	L	P	M	N	T	G	V	E
Template Known Secondary structure								S	S					T		T	T		B	T													.	T	T		S				T	T	S			S	S				.	.	.	.	.	.	.	.										T		S			.				S	S
Template Predicted Secondary structure																																	.																		.	.	.	.	.	.	.	.															.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.											.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.													140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	F	A	V	Y	T	A	L	L	E	P	.	.	.	.	.	.	.	.	.	.	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L
Query Conservation														.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.														.	.													.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.
Template Conservation																																					.	.																																.	.	.	.	.	.	.
Template Sequence		A	G	E	T	A	C	K	L	A	R	K	W	G	Y	T	V	K	G	I	Q	K	Y	K	A	K	I	V	F	A	A	G	N	F	W	G	.	.	R	T	L	S	A	I	S	S	S	T	D	P	T	S	Y	D	G	F	G	P	F	M	P	G	F	D	I	I	P	Y	N	.	.	.	.	.	.	.	D	L	P	A	L
Template Known Secondary structure																	T	T				T	T								T	T					.	.	S	S					T	T								T	T	S		S			S	S						T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.																																.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																		.	.									.	.	.	.																																							.	.
Query SS confidence																		.	.									.	.	.	.																																							.	.
Query Sequence		E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	.	.	S	A	Y	S	G	V	V	D	.	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	.	.	H	V	V	T	T	T	T	H	K	T
Query Conservation																		.	.									.	.	.	.																																							.	.
Alig confidence																		.	.									.	.	.	.																																							.	.
Template Conservation
Template Sequence		E	R	A	L	Q	D	P	N	V	A	A	F	M	V	E	P	I	Q	G	E	A	G	V	V	V	P	D	P	G	Y	L	M	G	V	R	E	L	C	T	R	H	Q	V	L	F	I	A	D	E	I	Q	T	G	L	A	R	T	G	R	W	L	A	V	D	Y	E	N	V	R	P	D	I	V	L	L	G	K	A	L	S
Template Known Secondary structure					T	T	S	T	T								S	S	B	T	T	T	T		B				T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S						G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V
Query Conservation
Alig confidence															.	.	.																																			.	.	.	.
Template Conservation															.	.	.																																			.	.	.	.
Template Sequence		G	G	L	Y	P	V	S	A	V	L	C	D	D	.	.	.	D	I	M	L	T	I	K	P	G	E	H	G	S	T	Y	G	G	N	P	L	G	C	R	V	A	I	A	A	L	E	V	L	E	E	.	.	.	.	E	N	L	A	E	N	A	D	K	L	G	I	I	L	R	N	E	L	M	K	L	P	S	D	V	V
Template Known Secondary structure		T	T	S	S										.	.	.				T	T	S		T	T	S	S			S	S	T	T																		.	.	.	.	T	T																	T	T	S		T	T	T
Template Predicted Secondary structure															.	.	.																																			.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.				.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		311			.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		S	.	.	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D
Query Conservation			.	.
Alig confidence			.	.																																					.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		T	A	V	R	G	K	G	L	L	N	A	I	V	I	K	E	T	K	D	W	D	A	W	K	V	C	L	R	L	R	D	N	G	L	L	A	K	P	T	.	.	.	.	.	.	.	.	.	.	H	G	D	I	I	R	F	A	P	P	L	V	I	K	.	.	.	.	E	D	E	L	R	E	S	I	E	I	I	N	K
Template Known Secondary structure								T	T									B	T	T	B												T	T					B	S	.	.	.	.	.	.	.	.	.	.	S	S	S								T	T			.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.											.	.	410	.	.	.	.	.	.	.	.	.	420	.					.	.	.	.	.	.	.	.	430	.	.	.	.
		389	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	L	S
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		435	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions