Email l.a.kelley@imperial.ac.uk Description P31469 Date Thu Jan 5 11:47:58 GMT 2012 Unique Job ID abf5369e4615f039

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2v5iA_ 34.0 60 PDB header:viral protein Chain: A: PDB Molecule:salmonella typhimurium db7155 bacteriophage det7 PDBTitle: structure of the receptor-binding protein of bacteriophage2 det7: a podoviral tailspike in a myovirus 2 d2gzoa1 28.3 31 Fold:VC0467-like Superfamily:VC0467-like Family:VC0467-like 3 d2hafa1 27.8 27 Fold:VC0467-like Superfamily:VC0467-like Family:VC0467-like 4 c3kzqE_ 26.0 37 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:putative uncharacterized protein vp2116; PDBTitle: the crystal structure of the protein with unknown function from vibrio2 parahaemolyticus rimd 2210633 5 c2aj2A_ 25.0 27 PDB header:unknown function Chain: A: PDB Molecule:hypothetical upf0301 protein vc0467; PDBTitle: x-ray crystal structure of protein vc0467 from vibrio2 cholerae. northeast structural genomics consortium target3 vcr8. 6 c2in3A_ 24.5 43 PDB header:isomerase Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative protein disulfide isomerase from2 nitrosomonas europaea 7 d2do8a1 23.9 23 Fold:VC0467-like Superfamily:VC0467-like Family:VC0467-like 8 c1x31D_ 23.8 19 PDB header:oxidoreductase Chain: D: PDB Molecule:sarcosine oxidase delta subunit; PDBTitle: crystal structure of heterotetrameric sarcosine oxidase from2 corynebacterium sp. u-96 9 d2ct1a1 21.6 36 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 10 c2dvwB_ 21.1 31 PDB header:cell cycle/protein-binding Chain: B: PDB Molecule:26s protease regulatory subunit 6b; PDBTitle: structure of the oncoprotein gankyrin in complex with s62 atpase of the 26s proteasome 11 c3mjhD_ 20.9 53 PDB header:protein transport Chain: D: PDB Molecule:early endosome antigen 1; PDBTitle: crystal structure of human rab5a in complex with the c2h2 zinc finger2 of eea1 12 c2jm1A_ 20.7 26 PDB header:metal binding protein Chain: A: PDB Molecule:transcriptional regulator atrx; PDBTitle: structures and chemical shift assignments for the add domain of the2 atrx protein 13 c2dzoD_ 20.5 31 PDB header:protein binding Chain: D: PDB Molecule:26s protease regulatory subunit 6b homolog; PDBTitle: crystal structure analysis of yeast nas6p complexed with2 the proteasome subunit, rpt3 14 d2gs5a1 19.5 29 Fold:VC0467-like Superfamily:VC0467-like Family:VC0467-like 15 d2dida1 19.1 21 Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain 16 d2ew0a1 19.0 23 Fold:VC0467-like Superfamily:VC0467-like Family:VC0467-like 17 c3mhvC_ 16.7 33 PDB header:protein transport Chain: C: PDB Molecule:vacuolar protein sorting-associated protein 4; PDBTitle: crystal structure of vps4 and vta1 18 c2yrgA_ 15.9 16 PDB header:ligase Chain: A: PDB Molecule:tripartite motif-containing protein 5; PDBTitle: solution structure of the b-box domain from tripartite2 motif-containing protein 5 19 c3gl5A_ 15.2 57 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative dsba oxidoreductase sco1869; PDBTitle: crystal structure of probable dsba oxidoreductase sco1869 from2 streptomyces coelicolor 20 d2ctda2 14.1 67 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 21 d2ct7a1 not modelled 13.5 17 Fold:RING/U-box Superfamily:RING/U-box Family:IBR domain 22 c2e5rA_ not modelled 13.2 26 PDB header:dna binding protein Chain: A: PDB Molecule:dystrobrevin alpha; PDBTitle: solution structure of the zz domain of dystrobrevin alpha2 (dystrobrevin-alpha) 23 c1rimA_ not modelled 13.1 50 PDB header:de novo protein Chain: A: PDB Molecule:e6apc2 peptide; PDBTitle: e6-binding zinc finger (e6apc2) 24 c1x4jA_ not modelled 13.0 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ring finger protein 38; PDBTitle: solution structure of ring finger in ring finger protein 38 25 c3bciA_ not modelled 12.1 38 PDB header:oxidoreductase Chain: A: PDB Molecule:disulfide bond protein a; PDBTitle: crystal structure of staphylococcus aureus dsba 26 c1rikA_ not modelled 12.0 50 PDB header:de novo protein Chain: A: PDB Molecule:e6apc1 peptide; PDBTitle: e6-binding zinc finger (e6apc1) 27 d1ibia2 not modelled 11.9 75 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 28 c2egmA_ not modelled 11.9 26 PDB header:transcription/metal binding protein Chain: A: PDB Molecule:tripartite motif-containing protein 41; PDBTitle: solution structure of the zf-b_box domain from human2 tripartite motif protein 41 29 d2yt9a2 not modelled 11.7 33 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 30 c2hr5B_ not modelled 11.7 13 PDB header:metal binding protein Chain: B: PDB Molecule:rubrerythrin; PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form 31 d2djaa1 not modelled 11.6 30 Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain 32 c1yzxB_ not modelled 11.5 29 PDB header:transferase Chain: B: PDB Molecule:glutathione s-transferase kappa 1; PDBTitle: crystal structure of human kappa class glutathione2 transferase 33 c2imeA_ not modelled 11.4 29 PDB header:transferase Chain: A: PDB Molecule:2-hydroxychromene-2-carboxylate isomerase; PDBTitle: 2-hydroxychromene-2-carboxylate isomerase: a kappa class glutathione-2 s-transferase from pseudomonas putida 34 d2fc7a1 not modelled 11.3 23 Fold:RING/U-box Superfamily:RING/U-box Family:ZZ domain 35 d1xpna_ not modelled 11.2 43 Fold:Prealbumin-like Superfamily:Hypothetical protein PA1324 Family:Hypothetical protein PA1324 36 d2d8ua1 not modelled 11.2 26 Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain 37 c2d8uA_ not modelled 10.9 26 PDB header:ligase Chain: A: PDB Molecule:ubiquitin ligase trim63; PDBTitle: solution structure of the b-box domain of the human2 tripartite motif-containing 63 protein 38 d2ds5a1 not modelled 10.7 15 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:ClpX chaperone zinc binding domain 39 c1ovxB_ not modelled 10.7 15 PDB header:metal binding protein Chain: B: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx; PDBTitle: nmr structure of the e. coli clpx chaperone zinc binding domain dimer 40 c2yt5A_ not modelled 10.6 26 PDB header:transcription Chain: A: PDB Molecule:metal-response element-binding transcription PDBTitle: solution structure of the phd domain of metal-response2 element-binding transcription factor 2 41 c3gmfA_ not modelled 10.6 43 PDB header:oxidoreductase Chain: A: PDB Molecule:protein-disulfide isomerase; PDBTitle: crystal structure of protein-disulfide isomerase from novosphingobium2 aromaticivorans 42 c2wwaJ_ not modelled 10.4 36 PDB header:ribosome Chain: J: PDB Molecule:60s ribosomal protein l19; PDBTitle: cryo-em structure of idle yeast ssh1 complex bound to the2 yeast 80s ribosome 43 d6rxna_ not modelled 10.3 23 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 44 d1dfxa2 not modelled 10.1 36 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Desulforedoxin 45 d1r4wa_ not modelled 9.9 29 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbA-like 46 d1x68a1 not modelled 9.4 23 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 47 d1iiza_ not modelled 9.4 21 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:C-type lysozyme 48 c3alrA_ not modelled 9.3 43 PDB header:metal binding protein Chain: A: PDB Molecule:nanos protein; PDBTitle: crystal structure of nanos 49 c2e6rA_ not modelled 9.3 24 PDB header:dna binding protein Chain: A: PDB Molecule:jumonji/arid domain-containing protein 1d; PDBTitle: solution structure of the phd domain in smcy protein 50 c2difA_ not modelled 9.3 21 PDB header:protein binding Chain: A: PDB Molecule:tripartite motif protein 39; PDBTitle: one sequence two fold ? : miss fold of the zf-b-box domain2 from human tripartite motif protein 39 51 c2csvA_ not modelled 9.1 20 PDB header:signaling protein Chain: A: PDB Molecule:tripartite motif protein 29; PDBTitle: solution structure of the zf-b_box type2 domain of human2 tripartite motif protein trim29 isoform alpha 52 c3fz5C_ not modelled 9.1 0 PDB header:isomerase Chain: C: PDB Molecule:possible 2-hydroxychromene-2-carboxylate isomerase; PDBTitle: crystal structure of possible 2-hydroxychromene-2-carboxylate2 isomerase from rhodobacter sphaeroides 53 c3kp9A_ not modelled 8.8 18 PDB header:blood coagulation,oxidoreductase Chain: A: PDB Molecule:vkorc1/thioredoxin domain protein; PDBTitle: structure of a bacterial homolog of vitamin k epoxide reductase 54 c3c7mB_ not modelled 8.8 43 PDB header:oxidoreductase Chain: B: PDB Molecule:thiol:disulfide interchange protein dsba-like; PDBTitle: crystal structure of reduced dsbl 55 c2e6iA_ not modelled 8.8 44 PDB header:transferase Chain: A: PDB Molecule:tyrosine-protein kinase itk/tsk; PDBTitle: solution structure of the btk motif of tyrosine-protein2 kinase itk from human 56 d1gd6a_ not modelled 8.7 21 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:C-type lysozyme 57 c2ds8A_ not modelled 8.5 15 PDB header:metal binding protein, protein binding Chain: A: PDB Molecule:atp-dependent clp protease atp-binding subunit PDBTitle: structure of the zbd-xb complex 58 d1i9za_ not modelled 8.5 17 Fold:DNase I-like Superfamily:DNase I-like Family:Inositol polyphosphate 5-phosphatase (IPP5) 59 c2k5cA_ not modelled 8.4 28 PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein pf0385; PDBTitle: nmr structure for pf0385 60 d2nwia1 not modelled 8.4 23 Fold:Chorismate lyase-like Superfamily:Chorismate lyase-like Family:AF1396-like 61 c3gn3B_ not modelled 8.4 43 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative protein-disulfide isomerase; PDBTitle: crystal structure of a putative protein-disulfide isomerase from2 pseudomonas syringae to 2.5a resolution. 62 d1x6fa1 not modelled 8.4 33 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 63 d1dx8a_ not modelled 8.3 31 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 64 d1vq0a2 not modelled 8.2 30 Fold:HSP33 redox switch-like Superfamily:HSP33 redox switch-like Family:HSP33 redox switch-like 65 d1wena_ not modelled 8.2 15 Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:PHD domain 66 c3ld0Q_ not modelled 7.9 30 PDB header:gene regulation Chain: Q: PDB Molecule:inhibitor of trap, regulated by t-box (trp) sequence rtpa; PDBTitle: crystal structure of b.licheniformis anti-trap protein, an antagonist2 of trap-rna interactions 67 d2csva1 not modelled 7.8 20 Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain 68 d1fkqa_ not modelled 7.8 20 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:C-type lysozyme 69 c1ij2C_ not modelled 7.8 27 PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position 70 d1iu5a_ not modelled 7.7 27 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 71 d1vzya2 not modelled 7.6 20 Fold:HSP33 redox switch-like Superfamily:HSP33 redox switch-like Family:HSP33 redox switch-like 72 d2dq5a1 not modelled 7.5 32 Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain 73 d1xjha_ not modelled 7.5 30 Fold:HSP33 redox switch-like Superfamily:HSP33 redox switch-like Family:HSP33 redox switch-like 74 c2krkA_ not modelled 7.5 38 PDB header:protein binding Chain: A: PDB Molecule:26s protease regulatory subunit 8; PDBTitle: solution nmr structure of 26s protease regulatory subunit 82 from h.sapiens, northeast structural genomics consortium3 target target hr3102a 75 d2rdva_ not modelled 7.4 27 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 76 c3cegA_ not modelled 7.4 12 PDB header:ligase Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 6; PDBTitle: crystal structure of the ubc domain of baculoviral iap2 repeat-containing protein 6 77 c3ghaA_ not modelled 7.3 43 PDB header:oxidoreductase Chain: A: PDB Molecule:disulfide bond formation protein d; PDBTitle: crystal structure of etda-treated bdbd (reduced) 78 c1ij2B_ not modelled 7.3 27 PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position 79 c3a44D_ not modelled 7.2 33 PDB header:metal binding protein Chain: D: PDB Molecule:hydrogenase nickel incorporation protein hypa; PDBTitle: crystal structure of hypa in the dimeric form 80 c2h51B_ not modelled 7.1 27 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-1; PDBTitle: crystal structure of human caspase-1 (glu390->asp and arg286->lys) in2 complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-3 propionylamino]-4-oxo-pentanoic acid (z-vad-fmk) 81 d1m4ma_ not modelled 7.1 11 Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat 82 c3gn5B_ not modelled 7.0 21 PDB header:dna binding protein Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021); PDBTitle: structure of the e. coli protein mqsa (ygit/b3021) 83 d2dipa1 not modelled 7.0 24 Fold:RING/U-box Superfamily:RING/U-box Family:ZZ domain 84 d1ypze2 not modelled 6.9 17 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:C1 set domains (antibody constant domain-like) 85 d1h7va_ not modelled 6.8 31 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 86 d2gvia2 not modelled 6.6 33 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:FwdE C-terminal domain-like 87 c2c2zB_ not modelled 6.5 0 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-8 p10 subunit; PDBTitle: crystal structure of caspase-8 in complex with aza-peptide michael2 acceptor inhibitor 88 d2cota1 not modelled 6.5 50 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 89 d1lv3a_ not modelled 6.5 26 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Hypothetical zinc finger protein YacG 90 d2ewla1 not modelled 6.4 40 Fold:E7 C-terminal domain-like Superfamily:E7 C-terminal domain-like Family:E7 C-terminal domain-like 91 d1hxma2 not modelled 6.4 22 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:C1 set domains (antibody constant domain-like) 92 d1f6sa_ not modelled 6.3 17 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:C-type lysozyme 93 d1rb9a_ not modelled 6.3 28 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 94 c2bsjB_ not modelled 5.9 57 PDB header:chaperone Chain: B: PDB Molecule:chaperone protein syct; PDBTitle: native crystal structure of the type iii secretion2 chaperone syct from yersinia enterocolitica 95 d1llmc2 not modelled 5.9 50 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 96 d1nh8a2 not modelled 5.9 32 Fold:Ferredoxin-like Superfamily:GlnB-like Family:ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain 97 c2ei5B_ not modelled 5.8 27 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ttha0061; PDBTitle: crystal structure of hypothetical protein(ttha0061) from thermus2 thermophilus 98 d1paaa_ not modelled 5.8 25 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 99 d1x6ea2 not modelled 5.8 63 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2