Job Description P69212 Confidence 2.90% Date Thu Jan 5 12:11:18 GMT 2012 Rank 15 Aligned Residues 82 % Identity 13% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		M	L	V	M	I	S	L	S	Y	I	F	L	S	F	A	V	K	K	I	A	L	G	V	A	Y	A	L	W	E	G	I	G	I	L	F	I	T	L	F	S	V	L	L	F	D	E	S	L	S	L	M	K	I	A	G	L	T	T	L	V	A	.	.	.	.	.	G	I	V	L	I	K	S	G	T	R	K	A	R	K
Query Conservation																																																															.	.	.	.	.
Alig confidence																							.																																								.	.	.	.	.
Template Conservation																							.
Template Sequence		L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	.	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	V	E	R	V	M	A	E
Template Known Secondary structure															T	T				T	T	T	.	T	T																			T	T	T			S
Template Predicted Secondary structure																							.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		112	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	L	E	V	N	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	L	P	P	K	E	A
Template Known Secondary structure		T	S			S
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions