Job Description P0ACA7 Confidence 100.00% Date Thu Jan 5 11:17:45 GMT 2012 Rank 29 Aligned Residues 187 % Identity 22% Template c3lypA_ PDB info PDB header:transcription Chain: A: PDB Molecule:stringent starvation protein a; PDBTitle: structure of stringent starvation protein a homolog from pseudomonas2 fluorescens Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	L	W	G	R	N	N	S	T	N	V	K	K	V	L	L	T	L	E	E	L	E	L	P	Y	E	Q	I	L	A	G	R	E	F	G	I	N	H	D	A	D	F	L	A	M	N	P	N	G	L	V	P	L	L	R	D	D	E	S	D	L	I	L	W	E	S	N	A	I	V	R	Y	L	A	A	Q	Y	G	Q
Query Conservation
Alig confidence																																		.	.	.	.	.	.																				.	.	.
Template Conservation																																		.	.	.	.	.	.																				.	.	.
Template Sequence		L	A	C	Y	S	D	P	A	D	H	Y	S	H	R	V	R	I	V	L	A	E	K	G	V	S	A	E	I	I	S	V	E	.	.	.	.	.	.	Q	P	P	K	L	I	E	V	N	P	Y	G	S	L	P	T	L	V	D	.	.	.	R	L	A	L	W	E	S	T	V	V	X	E	Y	L	D	E	R	Y	P	H
Template Known Secondary structure								T	T															T										.	.	.	.	.	.										T	T			S	S					.	.	.						S												S		S
Template Predicted Secondary structure																																		.	.	.	.	.	.																				.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	L	W	I	D	S	P	A	R	R	A	E	A	E	K	W	M	D	W	A	N	Q	T	L	S	N	A	H	R	G	I	L	M	G	L	V	R	T	P	P	E	E	R	D	Q	A	A	I	D	A	S	C	K	E	C	D	A	L	F	A	L	L	D	A	E	L	A	K	V	K	W	F	S	G	D	E	F	G	V
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.
Template Sequence		P	P	L	L	P	V	Y	P	V	A	R	A	N	S	R	L	L	I	H	R	I	Q	R	D	W	C	G	Q	V	D	L	I	L	.	.	.	.	.	.	.	D	P	R	T	K	E	A	A	R	V	Q	A	R	K	E	L	R	E	S	L	T	G	V	S	P	L	F	A	D	K	P	F	F	L	S	E	E	Q	S	L
Template Known Secondary structure		S			S		S	S																		T									.	.	.	.	.	.	.		T	T	S																				G	G	G	G	G	T	S	S	B	T	T	B	S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		G	D	I	A	I	A	P	F	I	Y	N	L	F	N	V	G	L	T	W	.	T	P	R	P	N	L	Q	R	W	Y	Q	Q	L	T	E	R	P	A	V	R	K	V	V	M
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		V	D	C	C	L	L	P	I	L	W	R	L	P	V	L	G	I	E	L	P	R	Q	A	K	P	L	L	D	Y	X	E	R	Q	F	A	R	E	A	F	Q	A	S	L	S
Template Known Secondary structure												T	T	T	T	T	T					G	G	G													S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions