Job Description P0ACA7 Confidence 100.00% Date Thu Jan 5 11:17:45 GMT 2012 Rank 7 Aligned Residues 188 % Identity 22% Template c3lykA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:stringent starvation protein a homolog; PDBTitle: structure of stringent starvation protein a homolog from2 haemophilus influenzae Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	L	W	G	R	N	N	S	T	N	V	K	K	V	L	L	T	L	E	E	L	E	L	P	Y	E	Q	I	L	A	G	R	E	F	G	I	N	H	D	A	D	F	L	A	M	N	P	N	G	L	V	P	L	L	R	D	D	E	S	D	L	I	L	W	E	S	N	A	I	V	R	Y	L	A	A	Q	Y	G	Q
Query Conservation
Alig confidence																																			.	.	.																							.	.
Template Conservation																																			.	.	.																							.	.
Template Sequence		X	T	L	F	S	N	K	D	D	I	Y	C	H	Q	V	K	I	V	L	A	E	K	G	V	L	Y	E	N	A	E	V	D	L	.	.	.	Q	A	L	P	E	D	L	X	E	L	N	P	Y	G	T	V	P	T	L	V	D	R	.	.	D	L	V	L	F	N	S	R	I	I	X	E	Y	L	D	E	R	F	P	H
Template Known Secondary structure								T	T															T										T	.	.	.	T	S										T	T			S						T	.	.	T					S												S		S
Template Predicted Secondary structure																																			.	.	.																							.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	L	W	I	D	S	P	A	R	R	A	E	A	E	K	W	M	D	W	A	N	Q	T	L	S	N	A	H	R	G	I	L	M	G	L	V	R	T	P	P	E	E	R	D	Q	A	A	I	D	A	S	C	K	E	C	D	A	L	F	A	L	L	D	A	E	L	A	K	V	K	W	F	S	G	D	E	F	G	V
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.
Template Sequence		P	P	L	X	Q	V	Y	P	V	S	R	A	K	D	R	L	L	X	L	R	I	E	Q	D	W	Y	P	T	L	A	K	A	E	N	.	.	.	.	.	.	.	.	.	G	T	E	K	E	K	T	S	A	L	K	Q	L	K	E	E	L	L	G	I	A	P	I	F	Q	Q	X	P	Y	F	X	N	E	E	F	G	L
Template Known Secondary structure		S			S		S	S																		T										.	.	.	.	.	.	.	.	.	S																			T							S	S	B	T	T	B	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.										120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		G	D	I	A	I	A	P	F	I	Y	N	L	F	N	V	G	.	.	L	T	W	T	P	R	P	N	L	Q	R	W	Y	Q	Q	L	T	E	R	P	A	V	R	K	V	V
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		V	D	C	Y	V	A	P	L	L	W	K	L	K	H	L	G	V	E	F	T	G	T	G	S	K	A	I	K	A	Y	X	E	R	V	F	T	R	D	S	F	L	Q	S	V
Template Known Secondary structure															T	T	T					S	T	T													T	S							T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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