Job Description P0ACA7 Confidence 99.83% Date Thu Jan 5 11:17:45 GMT 2012 Rank 87 Aligned Residues 134 % Identity 18% Template c2uz8A_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:eukaryotic translation elongation factor 1 PDBTitle: the crystal structure of p18, human translation elongation2 factor 1 epsilon 1 Resolution 2.0 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	N	P	N	G	L	V	P	L	L	R	D	D	E	S	D	L	I	L	W	E	S	N	A	I	V	R	Y	L	A	A	Q	Y	G	Q	K	R	L	W	I	D	S	P	A	R	R	A	E	A	E	K	W	M	D	W	A	N	Q	T	L	S	N	A	H	R	G	I	L	M	G	L	V	R	T	P	P	E	E	R
Query Conservation
Alig confidence																		.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	Q	G	E	R	Q	I	P	V	L	Q	T	N	N	G	.	P	S	L	X	G	L	T	T	I	A	A	H	L	V	K	Q	A	N	K	E	Y	L	L	G	S	T	A	E	E	K	A	X	V	Q	Q	W	L	E	Y	R	V	T	Q	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T	T	T							S	S		.					S												T	T		G	G	G	G		S	S																		T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		D	Q	A	A	I	D	A	S	C	K	E	C	D	A	L	F	A	L	L	D	A	E	L	A	K	V	K	W	F	S	G	D	E	F	G	V	G	D	I	A	I	A	P	F	I	Y	N	L	F	N	V	G	L	.	.	T	W	T	P	R	P	N	L	Q	R	W	Y	Q	Q	L	T	E	R	P	A	V	R	K	V	V
Query Conservation																																																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																													.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	N	D	I	H	T	L	L	X	D	L	N	S	Y	L	E	D	K	V	Y	L	T	G	Y	N	F	T	L	A	D	I	L	L	Y	Y	G	L	H	R	F	I	V	D	L	T	V	Q	E	K	E	K	Y	L	N	V	S	R	W	F	C	H	I	Q	H	Y	P	G	I	R	Q	H	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.														G	G	G		S	S	T	T	S	S	S																	T	T									T													S	T	T	T		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		204	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions