Job Description P0AFC7 Confidence 99.87% Date Thu Jan 5 11:25:56 GMT 2012 Rank 3 Aligned Residues 124 % Identity 19% Template d1e3da_ SCOP info HydA/Nqo6-like HydA/Nqo6-like Nickel-iron hydrogenase, small subunit Resolution 1.8

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.																						.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	K	N	S	I	W	P	Y	N	F	G	L	S	C	C	Y	V	E	M	V	T	S	F	T	A	V	H	D	V	A	R	F	G	A	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	A	S	P	R	Q	A	D	L	M	V	V	A	G	T	C	F	T	K	M	A
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.
Template Sequence		S	R	P	S	V	V	Y	L	H	A	A	E	C	T	G	C	S	E	A	L	L	R	T	Y	Q	P	F	I	D	T	L	I	L	D	T	.	I	S	L	D	Y	H	E	T	I	M	A	A	A	G	E	A	A	E	E	A	L	Q	A	A	V	N	G	P	D	G	F	I	C	L	V	E	G	A	I	P	T	G	M	D
Template Known Secondary structure											S	B			S								T		B	T	T	B							T	T	.							T	T	T		S															T		S	S								S	B				T	G	G
Template Predicted Secondary structure																																					.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
											108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																														.	.	.															.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																														.	.	.															.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	P	V	I	Q	R	L	Y	D	Q	M	L	E	P	K	W	V	I	S	M	G	A	C	A	N	S	G	G	M	Y	.	.	.	D	I	Y	S	V	V	Q	G	V	D	K	F	I	P	.	.	.	.	V	D	V	Y	I	P	G	C	P	P	R	P	E	A	Y	M	Q	A	L	M	L
Query Conservation		.	.	.	.	.	.	.	.	.																														.	.	.															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																														.	.	.															.	.	.	.
Template Conservation
Template Sequence		N	K	Y	G	Y	I	A	G	H	T	M	Y	D	I	C	K	N	I	L	P	K	A	K	A	V	V	S	I	G	T	C	A	C	Y	G	G	I	Q	A	A	K	P	N	P	T	A	A	K	G	I	N	D	C	Y	A	D	L	G	V	K	A	I	N	V	P	G	C	P	P	N	P	L	N	M	V	G	T	L	V	A
Template Known Secondary structure		G	T	T				T	T											G	G	G	S	S						S							G	G	G	G	S	T	T		T	T										G	G	G	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		172	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		164	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions