Job Description P0AFC7 Confidence 99.81% Date Thu Jan 5 11:25:56 GMT 2012 Rank 9 Aligned Residues 158 % Identity 22% Template d1cc1s_ SCOP info HydA/Nqo6-like HydA/Nqo6-like Nickel-iron hydrogenase, small subunit Resolution 2.15

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	N	S	I	W	P	Y	N	F	G	L	S	C	C	Y	V	E	M	V	T	S	F	T	A	V	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	R	F	G	A	E	V	L	R	A	S	P	R	Q	A	D	L	M	V	V	A	G	T	C	F	T	K	M	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																													.
Template Sequence		K	A	P	V	I	W	V	Q	G	Q	G	C	T	G	C	S	V	S	L	L	N	A	V	H	P	R	I	K	E	I	L	L	D	V	I	S	L	E	F	H	P	T	V	M	A	S	E	G	E	M	A	L	A	H	M	Y	E	I	A	.	E	K	F	N	G	N	F	F	L	L	V	E	G	A	I	P	T	A	K	E
Template Known Secondary structure										S	B			S								T		B	T	T	B								T							T	T	T		S															.			T	T	T	S	S						S	B				G	G	G
Template Predicted Secondary structure																																																													.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
																		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.										.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.										.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	I	Q	R	L	Y	D	Q	M	L	E	P	K	W	V	I	S	M	G	A	C	A	N	S	G	G	M	Y	.	.	.	D	I	Y	S	V	V	Q	G	V	.	.	.	.	.	.	D	K	F	I	P	V	D	V	Y	I	P	G	C	P	P	R	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.										.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.										.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	Y	C	I	V	G	E	A	K	A	H	H	H	E	V	T	M	M	E	L	I	R	D	L	A	P	K	S	L	A	T	V	A	V	G	T	C	S	A	Y	G	G	I	P	A	A	E	G	N	V	T	G	S	K	S	V	R	D	F	F	A	D	E	K	I	E	K	L	L	V	N	V	P	G	C	P	P	H	P
Template Known Secondary structure		G	T	T								S	S	S													G	G	G	S	S						S							T	G	G	G	S	T	T			S													T											S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.												.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	Y	M	Q	A	L	M	L	L	Q	E	.	.	.	.	.	.	.	.	.	.	.	S	I	G	K	E	R	R	P	L	S	W	V	V	G	D	Q	G	V	Y	R	A	N	M	Q	S	E	R	E	R	K	R	G	E	R	I	A	V	T
Query Conservation														.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		D	W	M	V	G	T	L	V	A	A	W	S	H	V	L	N	P	T	E	H	P	L	P	E	L	D	D	D	G	R	P	L	L	F	F	.	.	.	.	G	D	N	I	H	E	N	C	P	Y	L	D	K	Y	D	N	S	E	F	A	E	T
Template Known Secondary structure																	S	T	T	T	S					B		T	T	S		B					.	.	.	.	S	S	B	T	T	T	T		T	T						T	T		B		S	S
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions