Job Description P0AFC7 Confidence 99.83% Date Thu Jan 5 11:25:56 GMT 2012 Rank 6 Aligned Residues 125 % Identity 25% Template c3rgwS_ PDB info PDB header:oxidoreductase/oxidoreductase Chain: S: PDB Molecule:membrane-bound hydrogenase (nife) small subunit hoxk; PDBTitle: crystal structure at 1.5 a resolution of an h2-reduced, o2-tolerant2 hydrogenase from ralstonia eutropha unmasks a novel iron-sulfur3 cluster Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	N	S	I	W	P	Y	N	F	G	L	S	C	C	Y	V	E	M	V	T	S	F	T	A	V	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	R	F	G	A	E	V	L	R	A	S	P	R	Q	A	D	L	M	V	V	A	G	T	C	F	T	K	M	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																													.
Template Sequence		R	T	P	V	L	W	L	H	G	L	E	C	T	C	C	S	E	S	F	I	R	S	A	H	P	L	A	K	D	V	V	L	S	M	I	S	L	D	Y	D	D	T	L	M	A	A	A	G	H	Q	A	E	A	I	L	E	E	I	M	.	T	K	Y	K	G	N	Y	I	L	A	V	E	G	N	P	P	L	N	Q	D
Template Known Secondary structure											B			S							T	T		B	T	T	B								T							T	T	T		S															.			T	T	T		S						S	B		B		S	G	G
Template Predicted Secondary structure																																																													.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
											108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																														.	.	.																	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																														.	.	.																	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	P	V	I	Q	R	L	Y	D	Q	M	L	E	P	K	W	V	I	S	M	G	A	C	A	N	S	G	G	M	Y	.	.	.	D	I	Y	S	V	V	Q	G	V	D	K	F	I	P	V	D	.	.	V	Y	I	P	G	C	P	P	R	P	E	A	Y	M	Q	A	L	M	L	L	Q
Query Conservation		.	.	.	.	.	.	.	.	.																														.	.	.																	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																														.	.	.																	.	.
Template Conservation
Template Sequence		G	M	S	C	I	I	G	G	R	P	F	I	E	Q	L	K	Y	V	A	K	D	A	K	A	I	I	S	W	G	S	C	A	S	W	G	C	V	Q	A	A	K	P	N	P	T	Q	A	T	P	V	H	K	V	I	T	D	K	P	I	I	K	V	P	G	C	P	P	I	A	E	V	M	T	G	V	I	T	Y	M	L
Template Known Secondary structure		G	T	T	S			T	T												T	T		S											T		T	G	G	G	S	T	T		T	T		B			G	G	G	T			S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		174	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		165	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions