Job Description P0AFC7 Confidence 33.84% Date Thu Jan 5 11:25:56 GMT 2012 Rank 24 Aligned Residues 84 % Identity 12% Template c3fhcB_ PDB info PDB header:transport protein/hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase ddx19b; PDBTitle: crystal structure of human dbp5 in complex with nup214 Resolution 2.80 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	F	M	G	K	L	N	D	M	V	N	W	G	R	K	N	S	I	W	P	Y	N	F	G	L	S	C	C	Y	V	E	M	V	T	S	F	T	A	V	H	D	V	A	R	F	G	A	E	V	L	R	A	S	P	R	Q	A	D	L	M	V	V	A	G	T	C	F	T	K	M	A	P	V	I	Q	R	L	Y	D
Query Conservation
Alig confidence																																																		.																														.	.
Template Conservation																																																		.																														.	.
Template Sequence		Q	I	V	I	G	T	P	G	T	V	L	D	W	C	S	K	L	K	F	I	D	P	K	K	I	K	V	F	V	L	D	E	A	D	V	M	I	A	T	Q	G	H	Q	D	Q	S	I	R	.	I	Q	R	M	L	P	R	N	C	Q	M	L	L	F	S	A	T	F	E	D	S	V	W	K	F	A	Q	K	V	.	.
Template Known Secondary structure		S																S					G	G	G													T	T	S	T	T								.					S		T	T	S							S														.	.
Template Predicted Secondary structure																																																		.																														.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	L	E	P	K	W	V
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	V	P	D	P	N	V	I
Template Known Secondary structure		.	S	S	S
Template Predicted Secondary structure		.
Template SS confidence
			289	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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