Job Description P0AFC7 Confidence 99.77% Date Thu Jan 5 11:25:56 GMT 2012 Rank 10 Aligned Residues 154 % Identity 21% Template c2wpnA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [nifese] hydrogenase, small subunit; PDBTitle: structure of the oxidised, as-isolated nifese hydrogenase2 from d. vulgaris hildenborough Resolution 2.04 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query Sequence		I	W	P	Y	N	F	G	L	S	C	C	Y	V	E	M	V	T	S	F	T	A	V	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	R	F	G	A	E	V	L	R	A	S	P	R	Q	A	D	L	M	V	V	A	G	T	C	F	T	K	M	A	.	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																					.	.	.	.
Template Conservation																																																									.
Template Sequence		F	W	L	Q	G	Q	G	C	T	G	C	S	V	T	L	L	N	S	V	H	P	S	I	A	D	V	L	L	K	V	I	S	L	E	F	H	P	T	V	M	A	W	E	G	E	H	A	I	E	H	M	R	K	V	A	.	E	K	F	K	G	K	F	F	L	V	I	E	G	S	V	P	V	E	A	D	G	K	Y	C
Template Known Secondary structure						S	B			S								T				T	T								T							T	T	T		S															.			T	T	T	T							S	B				T	G	G	G	T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
												108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.							.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																														.	.	.																	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																														.	.	.																	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	P	V	I	Q	R	L	Y	D	Q	M	L	E	P	K	W	V	I	S	M	G	A	C	A	N	S	G	G	M	Y	.	.	.	D	I	Y	S	V	V	Q	G	V	D	K	F	I	P	V	D	.	.	.	.	.	.	V	Y	I	P	G	C	P	P	R	P	E	A	Y	M	Q	A
Query Conservation		.	.	.	.	.	.	.	.	.	.																														.	.	.																	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																														.	.	.																	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	G	E	A	N	H	H	E	I	S	M	V	D	A	L	K	E	F	G	P	N	A	A	A	V	L	A	V	G	T	C	A	A	Y	G	G	I	P	A	A	E	G	S	E	T	G	A	T	A	V	S	K	F	L	G	D	N	G	I	K	T	P	V	V	N	I	P	G	C	P	P	H	P	D	W	I	V	G	T
Template Known Secondary structure							T	T													G	G	G															T	G	G	G	S	T	T			S												T	T										S	S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		169	170	.	.	.																	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	M	L	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	I	G	K	E	R	R	P	L	S	W	V	V	G	D	Q	G	V	Y	R	A	N	M	Q	S	E	R	E	R	K	R	G	E	R	I	A	V	T
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																																								.	.	.	.
Template Sequence		V	V	L	A	L	D	A	I	K	K	N	G	L	E	G	G	L	A	E	V	V	K	V	L	D	S	D	G	R	P	T	P	F	F	G	R	N	I	.	.	.	.	H	E	N	C	P	Y	L	D	K	Y	D	E	G	V	M	S	A	T
Template Known Secondary structure																							T	T	B		T	T	S		B					S	S	B	T	.	.	.	.	G	G	G		T	T							T		B		S	S
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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