 |
| Job Description | P0AFC7 | | Confidence | 14.49% | Date | Thu Jan 5 11:25:56 GMT 2012 |
| Rank | 44 | Aligned Residues | 63 |
| % Identity | 19% | Template | c2afvB_ |
| PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:cobalamin biosynthesis precorrin isomerase; |
PDBTitle: the crystal structure of putative precorrin isomerase cbic2 in cobalamin biosynthesis
|
| Resolution | 3.00 Å |
|
 |
|   |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
C | Y | V | E | M | V | T | S | F | T | A | V | H | D | V | A | R | F | G | A | E | V | L | R | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | P | R | Q | A | D | L | M | V | V | A | G | T | C | F | T | K | M | A | P | V | I | Q | R | L | Y | D | Q |
| Query Conservation |   |
|   |
|
|   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |
|   |
|   |
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |
|
|   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|   |   |
|
| Template Sequence |   |
C | D | V | Q | M | I | L | S | G | L | N | P | E | R | L | K | V | Y | G | C | K | T | Y | C | F | I | S | D | E | D | V | I | E | N | A | K | R | K | N | S | T | R | A | I | E | S | I | Q | K | A | N | S | F | N | L | L | N | E | S | I | I | V | I | G | N | A | P | T | A | L | L | E | I | E | K | L | I | R | Q | E |
| Template Known Secondary structure |   |
 | S | S |  |  |  |  | T | T | S |
|  |  |  |  |  | T | T | T |
|
|  |  |
| G | G | G |
|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T | S |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
|   |
|   |   |
117 | . | . | 120 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | L | E | P | K | W | V | I | S | M |
| Query Conservation |   |
|
|
|
|
|   |
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|
|
|
|
|
|   |
| Template Sequence |   |
G | I | K | P | A | L | I | V | G | V |
| Template Known Secondary structure |   |
|
|
|
| S |  |  |  |  |
|
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|   |   |
157 | . | . | 160 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|