Job Description P33941 Confidence 99.93% Date Wed Jan 25 15:20:50 GMT 2012 Rank 60 Aligned Residues 309 % Identity 13% Template d3b60a2 SCOP info ABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region Resolution 3.70

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		M	E	L	L	V	L	V	W	R	Q	Y	R	W	P	F	I	S	V	M	A	L	S	L	A	S	A	A	L	G	I	G	L	I	A	F	I	N	Q	R	L	I	E	T	A	D	T	S	.	.	.	.	.	L	L	V	L	P	E	F	L	G	L	L	L	L	L	M	A	V	T	L	G	S	Q	L	A	L	T	T	L
Query Conservation																																																	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.
Template Conservation
Template Sequence		F	R	R	L	W	P	T	I	A	P	F	K	A	G	L	I	V	A	G	I	A	L	I	L	N	A	A	S	D	T	F	M	L	S	L	L	K	P	L	L	D	D	G	F	G	K	T	D	R	S	V	L	L	W	M	P	L	V	V	I	G	L	M	I	L	R	G	I	T	S	Y	I	S	S	Y	C	I	S	W	V
Template Known Secondary structure										G	G	G																										T					S	S	T	T	S	T	T							S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		G	H	H	F	V	Y	R	L	R	S	E	F	I	K	R	I	L	D	T	H	V	E	R	I	E	Q	L	G	S	A	S	L	L	A	G	L	T	S	D	V	R	N	I	T	I	A	F	V	R	.	L	P	E	L	V	Q	G	I	I	L	T	I	G	S	A	A	Y	L	W	M	L	S	G	K	M	L	L	V	T	A
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		S	G	K	V	V	M	T	M	R	R	R	L	F	G	H	M	M	G	M	P	V	A	F	F	D	K	Q	S	T	G	T	L	L	S	R	I	T	Y	D	S	E	Q	V	A	S	S	S	S	G	A	L	I	T	V	V	R	E	G	A	S	I	I	G	L	F	I	M	M	F	Y	Y	S	W	Q	L	S	I	I	L	V
Template Known Secondary structure																			T			S	T					S																																													T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		I	W	M	A	I	T	I	W	G	G	F	V	L	V	A	R	V	Y	K	H	M	A	T	L	R	E	T	E	D	K	L	Y	T	D	F	Q	T	V	L	E	G	R	K	E	L	T	L	N	R	E	R	A	E	Y	V	F	N	.	N	L	Y	I	P	D	A	Q	E	Y	R	H	H	I	I	R	A	D	T	F	H	L
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		V	L	A	P	I	V	S	I	A	I	R	V	V	S	K	R	F	R	S	I	S	K	N	M	Q	N	T	M	G	Q	V	T	T	S	A	E	Q	M	L	K	G	H	K	E	V	L	I	F	G	G	Q	E	V	E	T	K	R	F	D	K	V	S	N	K	M	R	L	Q	G	M	K	M	V	S	A	S	S	I	S	D
Template Known Secondary structure																																										T								T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	V	N	W	S	N	I	M	M	L	G	A	I	G	L	V	F	W	M	A	N	S	L	G	W	A	D	T	N	V	A	A	T	Y	S	L	T	L	L	F	L	R	T	P	L	L	S	A	V	G	A	L	P	T	L	L	T	A	Q	V	A	F	N	K	L	N	K	F	A	L	A	P	F	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	I	Q	L	I	A	S	L	A	L	A	F	V	L	Y	A	A	S	F	P	S	V	M	D	S	L	T	A	G	T	I	T	V	V	F	S	S	M	I	A	L	M	R	P	L	K	S	L	T	N	V	N	A	Q	F	Q	R	G	M	A	A	C	Q	T	L	F	A	I	L	D	S	E	Q	E	K
Template Known Secondary structure																					S	S	S	T	T	S	S	S																																													S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions