Job Description P33941 Confidence 99.92% Date Wed Jan 25 15:20:50 GMT 2012 Rank 61 Aligned Residues 308 % Identity 11% Template d2hyda2 SCOP info ABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region Resolution 3.00

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.													.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	L	L	V	L	V	W	R	Q	Y	R	W	P	F	I	S	V	M	A	L	S	L	A	S	A	A	L	G	I	G	L	I	A	F	I	N	Q	R	L	I	E	T	A	D	T	.	.	.	.	.	.	.	.	.	.	.	.	S	L	L	V	L	P	E	F	L	G	L	L	L	L	L	M	A	V	T	L	G	S
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	R	Y	L	Q	F	V	K	P	Y	K	Y	R	I	F	A	T	I	I	V	G	I	I	K	F	G	I	P	M	L	I	P	L	L	I	K	Y	A	I	D	G	V	I	N	N	H	A	L	T	T	D	E	K	V	H	H	L	T	I	A	I	G	I	A	L	F	I	F	V	I	V	R	P	P	I	E	F	I	R
Template Known Secondary structure										G	G	G													T	T	T																		T	T		S	S																								T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		Q	L	A	L	T	T	L	G	H	H	F	V	Y	R	L	R	S	E	F	I	K	R	I	L	D	T	H	V	E	R	I	E	Q	L	G	S	A	S	L	L	A	G	L	T	S	D	V	R	N	I	T	I	A	F	V	R	.	L	P	E	L	V	Q	G	I	I	L	T	I	G	S	A	A	Y	L	W	M	L	S	G
Query Conservation																																																										.
Alig confidence																																																										.
Template Conservation
Template Sequence		Q	Y	L	A	Q	W	T	S	N	K	I	L	Y	D	I	R	K	K	L	Y	N	H	L	Q	A	L	S	A	R	F	Y	A	N	N	Q	V	G	Q	V	I	S	R	V	I	N	D	V	E	Q	T	K	D	F	I	L	T	G	L	M	N	I	W	L	D	C	I	T	I	I	I	A	L	S	I	M	F	F	L	D	V
Template Known Secondary structure																											S							T	S																T																														T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		K	M	L	L	V	T	A	I	W	M	A	I	T	I	W	G	G	F	V	L	V	A	R	V	Y	K	H	M	A	T	L	R	E	T	E	D	K	L	Y	T	D	F	Q	T	V	L	E	G	R	K	E	L	T	L	N	R	E	R	A	E	Y	V	F	N	.	N	L	Y	I	P	D	A	Q	E	Y	R	H	H	I	I
Query Conservation																																																																		.
Alig confidence																																																																		.
Template Conservation
Template Sequence		K	L	T	L	A	A	L	F	I	F	P	F	Y	I	L	T	V	Y	V	F	F	G	R	L	R	K	L	T	R	E	R	S	Q	A	L	A	E	V	Q	G	F	L	H	E	R	V	Q	G	I	S	V	V	K	S	F	A	I	E	D	N	E	A	K	N	F	D	K	K	N	T	N	F	L	T	R	A	L	K	H	T
Template Known Secondary structure		T	T					T	T																																															T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	D	T	F	H	L	S	A	V	N	W	S	N	I	M	M	L	G	A	I	G	L	V	F	W	M	A	N	S	L	G	W	A	D	T	N	V	A	A	T	Y	S	L	T	L	L	F	L	R	T	P	L	L	S	A	V	G	A	L	P	T	L	L	T	A	Q	V	A	F	N	K	L	N	K	F	A	L	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	W	N	A	Y	S	F	A	A	I	N	T	V	T	D	I	G	P	I	I	V	I	G	V	G	A	Y	L	A	I	S	G	S	I	T	V	G	T	L	A	A	F	V	G	Y	L	E	L	L	F	G	P	L	R	R	L	V	A	S	F	T	T	L	T	Q	S	F	A	S	M	D	R	V	F	Q	L	I	D	E	D
Template Known Secondary structure																																	T	S												T					T	T																											T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		307	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		322	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions