Return to main results Retrieve Phyre Job Id

Job DescriptionP33941
Confidence100.00%DateWed Jan 25 15:20:50 GMT 2012
Rank10Aligned Residues237
% Identity26%Templated2hyda1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   308.310.........320.........330..... ....340.........350.........360.........370.........380......
Predicted Secondary structure 

























.




























Query SS confidence 



























.


















































Query Sequence  KAEFPRPQAFPNWQTLELRNVTFAYQDN. AFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKP
Query Conservation                 
   


  
   .  

  
 
 
  
    
 
 







   
 
      
 
 
    
Alig confidence 



























.


















































Template Conservation         
       
    
   
      

  

  
  

   
 
 








  
 
      
 
   
  
Template Sequence  KNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHN
Template Known Secondary structure 


TT






S


S
SSS

S
TT

STTSSTTTTTSS

STT
Template Predicted Secondary structure 











































Template SS confidence 















































































   325....330.........340.........350.........360.........370.........380.........390.........400....
 
   387..390.........400.........410.........420.........430........ .440...... ...450......
Predicted Secondary structure 






















.....







.....




Query SS confidence 



















































. . . . .







. . . . .









Query Sequence  VSGEQPEDYRKLFSAVFTDVWLFDQLLGPEGKPANPQLVEKWLAQLKMAHKL. . . . . ELSNGRIV. . . . . NLKLSKGQKK
Query Conservation 
           
  
 
   
   

  

           
         .....        .....   




 
Alig confidence 



















































.....







.....









Template Conservation           
  
  
 
       

 


                           
              

 
   
Template Sequence  IKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQ
Template Known Secondary structure  GGGS
T
SS



SSBGGG
SS

TT
TSTTGGG
B

GGGTTS
Template Predicted Secondary structure 








































Template SS confidence 















































































   405....410.........420.........430.........440.........450.........460.........470.........480....
 
   457..460.........470.........480.........490.........500.........510.........520.........530......
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  RVALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEERD
Query Conservation 

 




     





 

 

      
   
         


 


        
 
  
  
 
   
     
Alig confidence 






































..






































Template Conservation 

 




   
 






  


          
   ..    


 


    
   


  
  
 
   
    
Template Sequence  RLSIARIFLNNPPILILDEATSALDLESESIIQEALDVL. . SKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHREL
Template Known Secondary structure 

SSTTTT

..TTTS
SSGGGTTT
STT
Template Predicted Secondary structure 













..









Template SS confidence 















































































   485....490.........500.........510.........520... ......530.........540.........550.........560..
 
   537..540......
Predicted Secondary structure 






Query SS confidence 









Query Sequence  AASRDAVART
Query Conservation            
Alig confidence 









Template Conservation            
Template Sequence  IAKQGAYEHL
Template Known Secondary structure  TTS
Template Predicted Secondary structure 


Template SS confidence 









   563......570..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions