Return to main results Retrieve Phyre Job Id

Job DescriptionP33941
Confidence99.80%DateWed Jan 25 15:20:50 GMT 2012
Rank62Aligned Residues179
% Identity21%Templated1w1wa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   343......350.........360.........370.........380 ........
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Query Sequence  NLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LLDGKPVS
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Template Sequence  KVGFGESNFTSIIGPNGSGKSNMMDAISFVLGVLKDLIYRGPQSAYVKAFYQKGNKLVELMRIISRNGDTSYKIDGKTVS
Template Known Secondary structure 
TT
S
STTSSTT

GGGS




TTTTS
TT
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   20.........30.........40.........50.........60.........70.........80.........90.........
 
   389390.........400....... ..410.........420. ........430.........440.........
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Query Sequence  GEQPEDYRKLFSAVFTDVW. . LFDQLLGPEGKPAN. . . . . . . . . . . . PQLVEKWLAQLKMAHKLELSNGRIVNLK. . . . .
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Template Sequence  YKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRMFTFDYVSDHLDAIYRELTGNASLTKYHATPPLKRFKDME
Template Known Secondary structure  TT

TTT
TT
TT
TTS
T

T




TT




GG
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   128.130.........140.........150.........160.........170.........180.........190.........200.......
 
   450.........460.... .....470.........480.........490.........500.........510.........520..
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Query Sequence  . LSKGQKKRVALLLAL. . . . AEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISHDDHYFIHADRLLEM
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Template Sequence  YLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRH. RNPDLQFIVISLKNTMFEKSDALVGV
Template Known Secondary structure  GS
TSS

SSSTTTT

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BTTB
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   1128.1130.........1140.........1150.........1160.........1170........ .1180.........1190.........1200....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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