Return to main results Retrieve Phyre Job Id

Job DescriptionP33941
Confidence97.03%DateWed Jan 25 15:20:50 GMT 2012
Rank116Aligned Residues154
% Identity16%Templated1v5wa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   346...350.........360.........370.... .....380.........390.........400.........410.........
Predicted Secondary structure 



















......


















Query SS confidence 




























. . . . . .












































Query Sequence  IKRGELLFLIGGNGSGKSTLAMLLTGLYQ. . . . . . PQSGEILLDGKPVSGEQPEDYRKLFSAVFTDVWLFDQLLGPEGKP
Query Conservation 
  
    
 
 







   
 
   ......   
 
 
    
           
  
 
   
   

  

  
Alig confidence 




























......






...................


















Template Conservation 
  
    
 
  




 
  
                 
 ................... 
  
       
      
Template Sequence  IESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKII. . . . . . . . . . . . . . . . . . . FIDTENTFRPDRLRDIADR
Template Known Secondary structure  B
SS

TT
TTTS
BTTTB


...................SSS


Template Predicted Secondary structure 


















...................





Template SS confidence 















































































   116...120.........130.........140.........150....... ..160.........170......
 
   420.........430.........440.........450.........460.........470.... .....480.......
Predicted Secondary structure 

























............






Query SS confidence 






















































. . . . . . . . . . . .












Query Sequence  ANPQLVEKWLAQLKMAHKLELSNGRIVNLKLSKGQKKRVALLLALAEERDIILLD. . . . . . . . . . . . EWAADQDPHFRRE
Query Conservation           
                    




 


 




     




............
 

 

      
Alig confidence 



.

















.......
























............












Template Conservation      .                  .......                      


 
                    
  
Template Sequence  FNVD. HDAVLDNVLYARAYTSEH. . . . . . . QMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQ
Template Known Secondary structure  TT

.T

STT.......S
SSTSGGG

GGG
Template Predicted Secondary structure 



.






.......













Template SS confidence 















































































   177..180 .........190........ .200.........210.........220.........230.........240........
 
   488.490.........500.........510..... ....520......
Predicted Secondary structure 





.



Query SS confidence 



























.










Query Sequence  FYQVLLPLMQEMGKTIFAISHDDHYFIH. ADRLLEMRNGQ
Query Conservation 
   
         


 


       . 
 
  
  
 
Alig confidence 



























.










Template Conservation      
  

    
 
              
 

 
    
Template Sequence  MLSRLQKISEEYNVAVFVTNQMGHILAHASTTRISLRKGR
Template Known Secondary structure  T




TTTTSSSSS
Template Predicted Secondary structure 














Template SS confidence 







































   249250.........260.........270.........280........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions