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Job DescriptionP33941
Confidence99.15%DateWed Jan 25 15:20:50 GMT 2012
Rank74Aligned Residues183
% Identity21%Templated1e69a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution3.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   340.........350.........360.........370.... .....
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Query Sequence  GPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PQSGE
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Template Sequence  RPSLIGFSDR. VTAIVGPNGSGKSNIIDAIKWVFGEKFDMIFAGSENLPPAGSAYVELVFEENGEEITVARELKRTGENT
Template Known Secondary structure  S


SS.

TTT
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TTB


BTTB


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TTS
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   16...20..... ....30.........40.........50.........60.........70.........80.........90....
 
   380.........390.........400.........410.........420.........430.........440...... ...
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Query Sequence  ILLDGKPVSGEQPEDYRKLFSAVFTDVWLFDQLLGPEGKPANPQLVEKWLAQLKMAHKLELSNGRIV. . . . . . . . . . NLK
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Template Sequence  YYLNGSPVRLKDIRDRFAGTGLGVDFYSIVGQGQIDRIVNAYQRVNESFNRFISLLFFGGEGRLEISIRKPGRRDQKLSL
Template Known Secondary structure  TT
TTTSSTTTT

ST

TS




TTS


BGGG
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   105....110.........120.........130.........140.........150.........160.........170.........180....
 
   450.........460.... .....470.........480.........490.........500.........510......... 520...
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Query Sequence  LSKGQKKRVALLLAL. . . . AEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISHDDHYFIHADRL. . LEMR
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Template Sequence  LSGGEKALVGLALLFALMEIKPSPFYVLDEVDSPLDDYNAERFKRLLKENSKH. . TQFIVITHNKIVMEAADLLHGVTMV
Template Known Secondary structure  S
TTTS

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   1076...1080.........1090.........1100.........1110.........1120........ .1130.........1140.........1150...
 
   524.
Predicted Secondary structure 

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Query Sequence  NG
Query Conservation   
Alig confidence 

Template Conservation   
Template Sequence  NG
Template Known Secondary structure  SS
Template Predicted Secondary structure 

Template SS confidence 

   1154.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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