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Job DescriptionP33941
Confidence100.00%DateWed Jan 25 15:20:50 GMT 2012
Rank34Aligned Residues217
% Identity21%Templatec3gd7C_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   317..320.........330... ......340.........350.........360.........370.........380.........390.....
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Query Sequence  FPNWQTLELRNVTFAYQ. DNAFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQPEDY
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Template Sequence  WPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLL. NTEGEIQIDGVSWDSITLEQW
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   1204.....1210.........1220.........1230.........1240.........1250.........1260. ........1270.........1280..
 
   396...400.........410.........420.........430.........440......... 450.........460......
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Query Sequence  RKLFSAVFTDVWLFDQLLGPEGKPANPQLVEKWLAQLKMAHKLELSNGRIVNLK. . . . . . . . . LSKGQKKRVALLLALAE
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Template Sequence  RKAFGVIPQKVFIFSGTFRKNLDPNAAHSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLS
Template Known Secondary structure  GGGS





SSB
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TTTGGGSTTGGG
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   1283......1290.........1300.........1310.........1320.........1330.........1340.........1350.........1360..
 
   467..470.........480.........490.........500.........510... ......520.........530.......
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Query Sequence  ERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISHDDHYF. IHADRLLEMRNGQLSELTGEERDA
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Template Sequence  KAKILLLDEPSAHLDPVTYQIIRRTLKQA. . . FADCTVILCEARIEAMLECDQFLVIEENKVRQYDSILELY
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   1363......1370.........1380.........1390. ........1400.........1410.........1420.........1430.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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