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Job DescriptionP33941
Confidence99.97%DateWed Jan 25 15:20:50 GMT 2012
Rank57Aligned Residues223
% Identity20%Templatec3bk7A_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340.........350.........360.........370.........380........
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Query Sequence  AEFPRPQAFPNWQTLELRNVTFAYQDNAFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVS
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Template Sequence  TKLSERVDVERETLVEYPRLVKDY. . GSFKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLT. . .
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   330.........340.........350... ......360.........370.........380.........390.........400....
 
   389390.........400..... ....410.........420.........430.........440........ .450.........460......
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Query Sequence  GEQPEDYRKLFSAVFTD. VWLFDQLLGPEGKPANPQLVEKWLAQLKMAHKLELSNGRIVNL. KLSKGQKKRVALLLALAE
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Template Sequence  . . . . . . . . . . VAYKPQYIKAEYEGTVYELLSKIDSSKLNSNFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLR
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   405....410.........420.........430.........440.........450.........460.........470....
 
   467..470.........480.........490.........500.........510..... ....520... ......530.........540...
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Query Sequence  ERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISHDDHYFIH. ADRLLEMR. . NGQLSELTGEERDAASRDAV
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Template Sequence  DADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGRALPPMGMREGMNRF
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   475....480.........490.........500.........510.........520.........530.........540.........550....
 
   544..
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Query Sequence  ART
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Template Sequence  LAS
Template Known Secondary structure  TT
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   555..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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