Job Description P33941 Confidence 96.80% Date Wed Jan 25 15:20:50 GMT 2012 Rank 128 Aligned Residues 160 % Identity 16% Template c2zjbB_ PDB info PDB header:recombination Chain: B: PDB Molecule:meiotic recombination protein dmc1/lim15 homolog; PDBTitle: crystal structure of the human dmc1-m200v polymorphic2 variant Resolution 3.50 Å

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		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	R	G	E	L	L	F	L	I	G	G	N	G	S	G	K	S	T	L	A	M	L	L	T	G	L	Y	Q	P	Q	S	G	E	I	L	L	D	G	K	P	V	S	G	E	Q	P	E	D	Y	R	K	L	F	S	A	V	F	T	D	V	W	L	F	D	Q	L	L	G	P	E	G	K	P	A	N	P	Q	L	V
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		I	E	S	M	A	I	T	E	A	F	G	E	F	R	T	G	K	T	Q	L	S	H	T	L	C	V	T	A	Q	L	P	G	A	G	G	Y	P	G	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	F	I	D	T	E	N	T	F	R	P	D	R	L	R	D	I	A	D	R	F	N	V	D	.	H
Template Known Secondary structure				S	S	S								S	S		T												T	T	S		B	T	T	T	B					.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	S											G	G	G	G	T			.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.														.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.													.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	W	L	A	Q	L	K	M	A	H	K	L	E	L	S	N	G	R	I	V	N	L	K	L	S	K	G	Q	K	K	R	V	A	L	L	L	A	L	A	E	E	R	D	I	I	L	L	D	E	W	A	A	D	Q	D	P	H	.	.	.	.	.	.	.	.	.	.	.	.	F	R	R	E	F	Y	Q	V	L	L
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		D	A	V	L	D	N	V	L	Y	A	R	A	Y	T	S	E	H	.	.	.	.	.	.	.	Q	V	E	L	L	D	Y	V	A	A	K	F	H	E	E	A	G	I	F	K	L	L	I	I	D	S	I	M	A	L	F	R	V	D	F	S	G	R	G	E	L	A	E	R	Q	Q	K	L	A	Q	M	L	S	R	L	Q
Template Known Secondary structure					T	T	S								S	T	T		.	.	.	.	.	.	.															S		S	S									S	T							S		G	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.								.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.		.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		P	L	M	Q	E	M	G	K	T	I	F	A	I	S	H	D	D	H	Y	F	I	H	.	A	D	R	L	L	E	M	R	N	G	Q
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		K	I	S	E	E	Y	N	V	A	V	F	V	T	N	Q	M	G	H	I	L	A	H	A	S	T	T	R	I	S	L	R	K	G	R
Template Known Secondary structure							T	T																S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions