Job Description P33941 Confidence 96.89% Date Wed Jan 25 15:20:50 GMT 2012 Rank 122 Aligned Residues 157 % Identity 14% Template c2w0sB_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of vaccinia virus thymidylate kinase2 bound to brivudin-5'-monophosphate Resolution 2.92 Å

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		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	E	L	L	F	L	I	G	G	N	G	S	G	K	S	T	L	A	M	L	L	T	G	L	Y	Q	P	Q	S	G	E	I	L	L	D	G	K	P	V	S	G	E	Q	P	E	D	Y	R	K	L	F	S	A	V	F	T	D	V	W	L	F	D	Q	L	L	G	P	E	G	K	P	A	N	P	Q	L	V	E	K
Query Conservation
Alig confidence																																					.	.	.	.	.
Template Conservation																																					.	.	.	.	.
Template Sequence		R	G	A	L	I	V	F	E	G	L	D	K	S	G	K	T	T	Q	C	M	N	I	M	E	S	I	P	A	N	T	I	K	Y	L	N	.	.	.	.	.	F	P	Q	R	S	T	V	T	G	K	M	I	D	D	Y	L	T	R	K	K	T	Y	N	D	H	I	V	N	L	L	F	C	A	N	R	W	E	F	A	S
Template Known Secondary structure											S	T	T	S													S		T	T	S						.	.	.	.	.	S	S		T	T	S											T	T	S																		T	T
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.					.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.												.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure																							.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	A	Q	L	K	M	A	H	K	L	E	L	S	N	G	R	I	V	N	L	.	.	.	.	K	L	S	K	G	Q	K	K	R	V	A	L	L	L	A	L	A	E	E	R	D	I	I	L	L	D	E	W	A	.	.	.	.	.	.	.	.	.	.	.	A	D	Q	D	P	H	F	R	R	E	F	Y	Q	V	L
Query Conservation																							.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	I	Q	E	Q	L	E	Q	G	I	T	L	I	V	D	R	Y	A	F	S	G	V	A	Y	A	A	A	K	G	A	S	M	T	L	S	K	S	Y	E	S	G	L	P	K	P	D	L	V	I	F	L	E	S	G	S	K	E	I	N	R	N	V	G	E	E	I	Y	E	D	V	T	F	Q	Q	K	V	L	Q	E	Y
Template Known Secondary structure									T	T							S												T	T											T	T	S				S													T	T		B		S	S	T	T		B
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	L	M	Q	E	M	G	K	T	I	F	A	I	S	H	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	M	I	E	E	G	D	I	H	W	Q	I	I	S	S	E
Template Known Secondary structure							T		S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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