Job Description P33941 Confidence 100.00% Date Wed Jan 25 15:20:50 GMT 2012 Rank 14 Aligned Residues 236 % Identity 17% Template c2r6fA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:excinuclease abc subunit a; PDBTitle: crystal structure of bacillus stearothermophilus uvra Resolution 3.20 Å

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		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		L	A	P	F	K	A	E	F	P	R	P	Q	A	F	P	N	W	Q	T	L	E	L	R	N	V	T	F	A	Y	Q	D	.	N	A	F	S	V	G	P	I	N	L	T	I	K	R	G	E	L	L	F	L	I	G	G	N	G	S	G	K	S	T	L	A	M	L	L	T	G	L	Y	Q	P	Q	S	G	E	I	L	L
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		L	E	H	L	D	K	V	I	D	I	D	Q	S	P	I	G	R	T	P	R	S	N	P	A	T	Y	T	G	V	F	D	D	I	R	D	V	F	A	S	T	N	E	A	K	V	R	G	Y	K	K	G	R	F	S	F	N	V	K	G	G	R	C	E	A	C	H	G	D	G	I	I	K	I	E	X	H	F	L	P	D
Template Known Secondary structure		G	G	G		S							S	S		S		S	S	T	T								T											T	S						T	T			T	T	T	T		T	T	S	T	T	T	B		T	T	T	T	T		S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.									.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.
Query Sequence		D	G	K	P	V	S	G	E	Q	P	E	D	Y	R	K	L	F	S	A	V	F	T	D	V	W	L	F	D	Q	L	L	G	P	E	G	K	P	A	N	.	.	.	.	.	.	.	.	P	Q	L	V	E	K	W	L	A	Q	L	K	M	A	H	K	L	E	L	S	N	G	R	I	V	N	L	K	L	S	K	G	Q
Query Conservation																																									.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		V	Y	V	P	C	E	V	C	H	.	.	.	.	G	K	R	Y	N	R	E	T	L	E	V	T	Y	K	G	K	N	I	A	E	V	L	D	X	T	V	E	D	A	L	D	F	F	A	S	I	P	K	I	K	R	K	L	E	T	L	Y	D	V	G	L	G	Y	X	K	L	G	Q	P	A	T	T	L	S	G	G	E
Template Known Secondary structure							T	T	T	T	.	.	.	.	T			B		T	T	G	G	G			B	T	T	B							T	S	B								T		S														T	T		S	S	S	B	T	T			G	G	G
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		755	.	.	.	.	760	.	.	.					.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830
		455	.	.	.	.	460	.	.	.	.	.	.	.				.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.							.	.	.
Predicted Secondary structure															.	.	.																																																								.	.	.	.	.	.
Query SS confidence															.	.	.																																																								.	.	.	.	.	.
Query Sequence		K	K	R	V	A	L	L	L	A	L	A	E	E	.	.	.	R	D	I	I	L	L	D	E	W	A	A	D	Q	D	P	H	F	R	R	E	F	Y	Q	V	L	L	P	L	M	Q	E	M	G	K	T	I	F	A	I	S	H	D	D	H	Y	F	I	H	A	D	R	L	L	E	M	.	.	.	.	.	.	R	N	G
Query Conservation															.	.	.																																																								.	.	.	.	.	.
Alig confidence															.	.	.																																.																								.	.	.	.	.	.
Template Conservation																																																	.
Template Sequence		A	Q	R	V	K	L	A	A	E	L	H	R	R	S	N	G	R	T	L	Y	I	L	D	E	P	T	T	G	L	H	V	D	D	I	A	R	L	L	D	V	L	H	R	L	V	D	N	.	G	D	T	V	L	V	I	E	H	N	L	D	V	I	K	T	A	D	Y	I	I	D	L	G	P	E	G	G	D	R	G	G
Template Known Secondary structure												S	S				S									T	T	T	T																			T	.	T														T	T		S							S	S	S	T	T	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		831	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.		.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	S	E	L	T	G	E	E	R	D	A	A	S	R	D	A	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	V	A	V	G	T	P	E	E	V	A	E	V	K	E	S	H	T
Template Known Secondary structure		S						S						T		T	T
Template Predicted Secondary structure
Template SS confidence
		910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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