Return to main results Retrieve Phyre Job Id

Job DescriptionP33941
Confidence99.57%DateWed Jan 25 15:20:50 GMT 2012
Rank66Aligned Residues86
% Identity22%Templatec1xexB_
PDB info PDB header:cell cycleChain: B: PDB Molecule:smc protein; PDBTitle: structural biochemistry of atp-driven dimerization and dna2 stimulated activation of smc atpases.
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   449450.........460.... .....470.........480.........490.........500.........510.........520 ..
Predicted Secondary structure 


....


















..
Query SS confidence 















. . . .























































. .

Query Sequence  KLSKGQKKRVALLLAL. . . . AEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISHDDHYFIHADRLL. . EM
Query Conservation   




 


 




....     





 

 

      
   
         


 


        
 
 .. 
Alig confidence 















....

































..



















..

Template Conservation   





  
 


 

        






   

      
   
  
   .. 






        
 
  
  
Template Sequence  AMSGGEKALTALAFVFAIQKFKPAPFYLFDQIDAHLDDANVKRVADLIKESSKE. . SQFIVITLRDVMMANADKIIGVSM
Template Known Secondary structure  GS
S

SSS
SS

TTT..S
S
TT
S
Template Predicted Secondary structure 














..






Template SS confidence 















































































   1068.1070.........1080.........1090.........1100.........1110.........1120. ........1130.........1140.....
 
   523.. ....530......
Predicted Secondary structure 

..

Query SS confidence 


. .










Query Sequence  RNG. . QLSELTGEERD
Query Conservation    
.. 
   
     
Alig confidence 


..










Template Conservation    
 
 
      
  
Template Sequence  RDGVSKVVSLSLEKAM
Template Known Secondary structure  TT
Template Predicted Secondary structure 

Template SS confidence 















   1146...1150.........1160.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions