Job Description P33941 Confidence 96.59% Date Wed Jan 25 15:20:50 GMT 2012 Rank 135 Aligned Residues 107 % Identity 22% Template c1sxjA_ PDB info
PDB header: replicationChain: A: PDB Molecule: activator 1 95 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution 2.85 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
350 . . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420 . . . . . . . . .
Predicted Secondary structure
Query SS confidence
Query Sequence
E L L F L I G G N G S G K S T L A M L L T G L Y Q P Q S G E I L L D G K P V S G E Q P E D Y R K L F S A V F T D V W L F D Q L L G P E G K P A N P Q L V E K W L
Query Conservation
Alig confidence
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Template Conservation
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Template Sequence
R A A M L Y G P P G I G K T T A A H L V A Q E L .
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G Y D I L E Q N A .
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S D V R S K T L L N
Template Known Secondary structure
S S T T S S T . . . . . . . . . . T T . . . . . . . . . . . . . . . . . . . . . . . . . . . T S
Template Predicted Secondary structure
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Template SS confidence
347 . . 350 . . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . .
430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490 . . . . . . . . . 500 . . . . . . . . .
Predicted Secondary structure
Query SS confidence
Query Sequence
A Q L K M A H K L E L S N G R I V N L K L S K G Q K K R V A L L L A L A E E R D I I L L D E W A A D Q D P H F R R E F Y Q V L L P L M Q E M G K T I F A I S H D
Query Conservation
Alig confidence
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Template Conservation
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Template Sequence
A G V K N A L D N M S V V G Y F K H Q N L N G .
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K H F V I I M D E V D G M S G G .
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D R G G V G Q L A Q F C R K T S T P L I L I C N E
Template Known Secondary structure
T G G G G T T S T T T T T S S T . . . . . . . . . . . . . . T S S G G G T T . . S T T S S S
Template Predicted Secondary structure
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Template SS confidence
390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420 . . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
