Job Description P39172 Confidence 96.03% Date Thu Jan 5 11:58:20 GMT 2012 Rank 16 Aligned Residues 208 % Identity 14% Template c3pdiG_ PDB info PDB header:protein binding Chain: G: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nife; PDBTitle: precursor bound nifen Resolution 2.40 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	F	I	A	S	A	I	A	D	G	V	T	E	T	E	V	L	L	P	D	G	A	S	E	H	D	Y	S	L	R	P	S	D	V	K	R	L	Q	N	A	D	L	V	V	W	V	G	P	E	M	E	A	F	M	Q	K	P	V	S	K	L	P	G	A	K	Q	V	T	I	A	Q	L	E	D	V	K	P	L	L
Query Conservation
Alig confidence											.	.	.														.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.
Template Conservation											.	.	.														.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.
Template Sequence		V	L	P	L	L	D	E	L	G	.	.	.	L	R	V	L	C	T	L	A	G	D	A	R	Y	.	.	.	.	.	.	.	R	E	V	Q	T	M	H	R	A	E	V	N	M	M	V	C	S	K	A	M	L	N	V	A	R	K	L	Q	E	T	Y	G	T	P	W	F	E	G	S	F	.	.	.	.	.	.	.	.
Template Known Secondary structure		T								T	.	.	.								T	S	S	B			.	.	.	.	.	.	.				T	T	G	G	G		S						S			T	T																				S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.														.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.								.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		M	K	S	I	H	G	D	D	D	D	H	D	H	A	E	K	S	D	E	D	H	H	H	G	D	F	N	M	H	L	W	L	S	P	E	I	A	R	A	T	A	V	A	I	H	G	K	L	.	.	V	E	L	M	P	Q	S	R	A	K	L	D	A	N	L	K	D	F	E	A	Q	L	A	S	T	E	T	Q	V	G
Query Conservation																																																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.																													.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	I	T	D	T	S	Q	A	L	R	D	F	A	R	L	L	D	D	P	D	L	T	A	R	T	E	A	L	I	A	R	E	E	A	K	V	R	A	A	L	E	P	W	R	A	R	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S															T	T																														.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Template SS confidence
																																	275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.																.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																		.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	E	L	A	P	L	K	G	K	G	Y	F	V	F	H	D	.	.	.	.	.	A	Y	G	Y	F	E	K	Q	F	G	L	T	P	L	G	H	F	T	V	N	P	E	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	A	Q	R	L	H	E	I	R	T	Q	L	V	E	Q	K	A	T	C
Query Conservation																		.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.												.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	L	E	G	K	R	V	L	L	Y	T	G	G	V	K	S	W	S	V	V	S	A	L	Q	D	L	G	M	K	V	V	A	T	G	T	K	K	S	T	E	E	D	K	A	R	I	R	E	L	M	G	D	D	V	K	M	L	D	E	G	N	A	R	V	L	L	K	T	V	D	E	Y	Q	A	D	I
Template Known Secondary structure		.	.	.	.	.		T	T								S	S	S													T								B	S	S	S												S		S	S			B			S		S											T	T		S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	A	E	P	Q	F	R	P	A	V	V	E	S	V	A	R	G	T	S	V	R	M	G	T	L	D	P	L	G	T	N	I	K	L	G	K	T	S	Y	S	E	F	L	S	Q	L	A	N	Q	Y
Query Conservation
Alig confidence									.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		L	I	A	G	G	R	N	.	.	.	.	.	M	Y	T	A	L	K	G	R	V	P	F	L	D	I	N	Q	E	R	E	F	G	Y	A	G	Y	D	G	M	L	E	L	V	R	Q	L	C	I	T	L
Template Known Secondary structure						G	G	G	.	.	.	.	.							T	T			B					S	S	S	S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		397	.	.	400	.	.	.						.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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