Return to main results Retrieve Phyre Job Id

Job DescriptionP39172
Confidence28.85%DateThu Jan 5 11:58:20 GMT 2012
Rank99Aligned Residues92
% Identity10%Templatec3o3nB_
PDB info PDB header:lyaseChain: B: PDB Molecule:beta-subunit 2-hydroxyacyl-coa dehydratase; PDBTitle: (r)-2-hydroxyisocaproyl-coa dehydratase in complex with its substrate2 (r)-2-hydroxyisocaproyl-coa
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   207..210.........220.........230.........240.........250........ .260.........270.........
Predicted Secondary structure 




















.......




Query SS confidence 



















































. . . . . . .




















Query Sequence  HDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQ. . . . . . . FRPAVVESVARGTSVRMGTLD
Query Conservation 
 
  
     

             

   
  
   

   
  
  
  .......        

   
  
  

Alig confidence 










....




































.......




















Template Conservation   


  

  
....
    
         
   
   
     



      
         
   
   


 
 

Template Sequence  DDALERLARQW. . . . SNIEGCSLAYDPKKKRGSLIVDEVKKKDIDGVIFCMMKFCDPEEYDYPLVRKDIEDSGIPTLYVE
Template Known Secondary structure  S
....

S
TTS

TT
TTT

TT
TT

Template Predicted Secondary structure 

....























Template SS confidence 















































































   275....280..... ....290.........300.........310.........320.........330.........340.........350
 
   280.........290.........300........
Predicted Secondary structure 












Query SS confidence 




























Query Sequence  PLGTNIKLGKTSYSEFLSQLANQYASCLK
Query Conservation 

          
      
   
   
 
Alig confidence 









......












Template Conservation   
       
......  





 
 
 
Template Sequence  IDQQTQNNEQ. . . . . . ARTRIQTFAEMMS
Template Known Secondary structure 
SS




......T
Template Predicted Secondary structure 






......
Template SS confidence 




























   351........360 .........370...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions