Job Description P39172 Confidence 42.28% Date Thu Jan 5 11:58:20 GMT 2012 Rank 68 Aligned Residues 128 % Identity 9% Template c3o3nA_ PDB info PDB header:lyase Chain: A: PDB Molecule:alpha-subunit 2-hydroxyisocaproyl-coa dehydratase; PDBTitle: (r)-2-hydroxyisocaproyl-coa dehydratase in complex with its substrate2 (r)-2-hydroxyisocaproyl-coa Resolution 2.30 Å

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.								.	.	200	.	.	.	.	.	.	.								.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.											.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.											.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	F	E	A	Q	L	A	S	T	E	T	Q	V	G	N	E	L	A	P	.	.	.	.	.	.	.	L	K	G	K	G	Y	F	V	F	H	.	.	.	.	.	.	.	D	A	Y	G	Y	F	E	K	Q	F	G	L	T	P	L	G	H	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.	.											.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.											.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	T	T	E	A	F	K	L	L	I	E	E	L	E	D	N	M	K	T	G	K	S	S	F	R	G	E	E	K	Y	R	I	M	M	E	G	I	P	C	W	P	Y	I	G	Y	K	M	K	T	L	A	K	F	G	V	N	M	T	G	S	V	Y	P	H	A	W	A	L	Q	Y	E	V	N	D	L	D	G	M	A
Template Known Secondary structure																				T	T	T			S	S		S										S				G	G	G											T	T							S					T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
						227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.									.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure		.	.	.	.																														.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																														.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	V	N	P	E	I	Q	P	G	A	Q	R	L	H	E	I	R	T	Q	L	V	E	Q	K	A	T	C	V	F	A	.	.	.	.	.	.	.	.	E	P	Q	F	R	P	A	V	V	E	S	V	A	R	G	T	S	V	R	M	G	T	L	D	P	L	G	T	N	I	K	L	G	K	T	S	Y	S	E
Query Conservation		.	.	.	.																														.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																														.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		V	A	Y	S	T	M	F	N	N	V	N	L	D	R	M	T	K	Y	R	V	D	S	L	V	E	G	K	C	D	G	A	F	Y	H	M	N	R	S	C	K	L	M	S	L	I	Q	Y	E	M	Q	R	R	A	A	E	E	T	G	L	P	Y	A	G	F	.	.	.	D	G	D	Q	A	D	P	R	A	F	T	N	A
Template Known Secondary structure						T	S	G	G	G	B																T	T		S								S	S						T	T																				.	.	.				S	S		T	T	S
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.				.	.	.	.	.	.	.	.	380	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	S	Q	L	A	N	Q	Y	A	S	C	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	F	E	T	R	I	Q	G	L	V	E	V	M	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions