Job Description P39172 Confidence 70.31% Date Thu Jan 5 11:58:20 GMT 2012 Rank 31 Aligned Residues 95 % Identity 11% Template c3lhkA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative dna binding protein mj0014; PDBTitle: crystal structure of putative dna binding protein from2 methanocaldococcus jannaschii. Resolution 2.20 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.						.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.
Query SS confidence																																																.	.	.	.	.
Query Sequence		F	E	K	Q	F	G	L	T	P	L	G	H	F	T	V	N	P	E	I	Q	P	G	A	Q	R	L	H	E	I	R	T	Q	L	V	E	Q	K	A	T	C	V	F	A	E	P	Q	.	.	.	.	.	F	R	P	A	V	V	E	S	V	A	R	G	T	S	V	R	M	G	T	L	D	P	L	G	T	N	I	K	L
Query Conservation																																																.	.	.	.	.
Alig confidence																																																.	.	.	.	.																						.	.	.
Template Conservation																																																																										.	.	.
Template Sequence		Y	A	E	E	N	G	W	D	I	Q	I	L	K	D	I	G	S	G	L	N	E	K	R	K	N	Y	K	K	L	L	K	X	V	X	N	R	K	V	E	K	V	I	I	A	Y	P	D	R	L	T	R	F	G	F	E	T	L	K	E	F	F	K	S	Y	G	T	E	I	V	I	I	N	.	.	.	K	K	H	K	T
Template Known Secondary structure						T	T										S		T	T		T	T													T	T								S	S						S	S												T	T						S		.	.	.	S	S
Template Predicted Secondary structure																																																																										.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	T	S	Y	S	E	F	L	S	Q	L	A	N	Q	Y	A	S	C	L	K	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Q	E	E	L	V	E	D	L	I	T	I	V	S	H	F	A	G	K	L	Y	G	X
Template Known Secondary structure																								T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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