Job Description P39172 Confidence 24.46% Date Thu Jan 5 11:58:20 GMT 2012 Rank 122 Aligned Residues 92 % Identity 21% Template c3k6sB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-2; PDBTitle: structure of integrin alphaxbeta2 ectodomain Resolution 3.50 Å

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230																.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	K	G	Y	F	V	F	H	D	A	Y	G	Y	F	E	K	Q	F	G	L	T	P	L	G	H	F	T	V	N	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	P	G	A	Q	R	L	H	E	I	R	T	Q	L	V	E	Q	K	A	T	C	V	F	A	E	P	Q	F	R	P	A	V
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation																					.	.																																						.	.	.
Template Sequence		V	T	R	L	L	V	F	A	T	D	D	G	F	H	F	A	G	D	G	.	.	K	L	G	A	I	L	T	P	N	D	G	R	C	H	L	E	D	N	L	Y	K	R	S	N	E	F	D	Y	P	S	V	G	Q	L	A	H	K	.	.	.	L	A	E	N	N	I	Q	P	I	F	A	V	T	S	R	M	V	K	T
Template Known Secondary structure		S									S	S					T	T	G	G	.	.	G	G	G	T							S					S	S	S	B		S	S	G	G	G	S					G	G	G					.	.	.				T	T		B							G	G	G
Template Predicted Secondary structure																					.	.																																						.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.
Predicted Secondary structure										.																		.
Query SS confidence										.																		.
Query Sequence		V	E	S	V	A	R	G	T	.	S	V	R	M	G	T	L	D	P	L	G	T	N	I	K	L	G	.	K	T	S	Y	S	E	F
Query Conservation										.																		.
Alig confidence										.																		.
Template Conservation
Template Sequence		Y	E	K	L	T	E	I	I	P	K	S	A	V	G	E	L	S	E	D	S	S	N	V	V	Q	L	I	K	N	A	Y	N	K	L
Template Known Secondary structure									S	S	S								T	T			S		G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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