Job Description P39172 Confidence 60.34% Date Thu Jan 5 11:58:20 GMT 2012 Rank 40 Aligned Residues 182 % Identity 15% Template c2xdqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex Resolution 2.40 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	F	I	A	S	A	I	A	D	G	V	T	E	T	E	V	L	L	P	D	G	A	S	E	H	D	Y	S	L	R	P	S	D	V	K	R	L	Q	N	A	D	L	V	V	W	V	G	P	E	M	E	A	F	M	Q	K	P	V	S	K	L	P	G	A	K	Q	V	T	I	A	Q	L	E	D	V	K	P	L	L
Query Conservation
Alig confidence											.	.	.									.	.	.	.	.	.	.	.																																			.													.	.	.	.	.
Template Conservation											.	.	.									.	.	.	.	.	.	.	.																																			.													.	.	.	.	.
Template Sequence		L	T	L	E	L	K	K	Q	G	.	.	.	I	K	V	S	G	W	L	P	.	.	.	.	.	.	.	.	A	K	R	Y	T	E	L	P	V	I	D	E	G	Y	Y	V	A	G	V	N	P	F	L	S	R	T	A	T	T	L	I	R	R	R	.	K	C	Q	L	I	T	A	P	F	P	I	G	.	.	.	.	.
Template Known Secondary structure							G	G	G	T	.	.	.								S	.	.	.	.	.	.	.	.		S	S	G	G	G						T	T						S	S	T	T											T	T	.										S	B		.	.	.	.	.
Template Predicted Secondary structure											.	.	.									.	.	.	.	.	.	.	.																																			.													.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.									230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	S	I	H	G	D	D	D	D	H	D	H	A	E	K	S	D	E	D	H	H	H	G	D	F	N	M	H	L	W	L	S	P	E	I	A	R	A	T	A	V	A	I	H	G	K	L	V	E	L	M	P	Q	S	R	A	K	L	D	A	N	L	K	D	F	E	A	Q	L	A	S	T	E	T	Q	V	G	N	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.						.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.						.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	G	T	R	T	W	I	E	Q	I	C	A	T	F	G	.	I	Q	P	Q	G	.	.	.	.	.	.	.	.	.	.	L	A	E	R	E	A	E	T	W	Q	K	L	S	D	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T	.					S	.	.	.	.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.						.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																			276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.											.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		L	A	P	L	K	G	K	G	Y	F	V	F	H	D	.	.	.	.	.	A	Y	G	Y	F	E	K	Q	F	G	L	T	P	L	G	H	F	T	V	N	P	E	I	Q	P	G	A	Q	R	L	H	E	I	R	T	Q	L	V	E	Q	K	A	T	C	V	F	A	E	P	Q	F	R	P	A	V	V	E	S	V	A	R
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.
Template Conservation
Template Sequence		L	E	L	V	R	G	K	S	V	F	F	M	G	D	N	L	L	E	I	S	L	A	R	F	L	I	R	C	G	M	R	V	L	E	I	G	I	P	Y	M	D	K	R	Y	Q	A	A	E	L	A	L	L	S	Q	T	C	A	E	M	G	H	P	L	P	T	I	V	E	K	P	D	N	Y	N	Q	L	Q	R	I	K
Template Known Secondary structure						T	T									S	S												T	T									S																					T	T									S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	S	V	R	M	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	Q	P	D	L	V	I
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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