Return to main results Retrieve Phyre Job Id

Job DescriptionP39172
Confidence54.02%DateThu Jan 5 11:58:20 GMT 2012
Rank48Aligned Residues123
% Identity11%Templatec2qzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:glycogen synthase; PDBTitle: crystal structure of wild-type e.coli gs in complex with adp2 and glucose(wtgsb)
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........120.........130.........
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  HDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQVTIAQLEDVKPLLMKSIHGDDDDHDHAEKSDEDHHHGD
Query Conservation 
 


 
 
   
  




  
  

  
              
                                   
Alig confidence 






















.













































..........
Template Conservation                 

  
 

.  
      




 
 




  

  
 
  
           
..........
Template Sequence  QIGYHEAFSHRIMGGADVILVPS. RFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASG. . . . . . . . . .
Template Known Secondary structure  S


S

.S

SS
ST
SS

B

TT


B..........
Template Predicted Secondary structure 








.




























..........
Template SS confidence 















































































   352.......360.........370.... .....380.........390.........400.........410.........420
 
   140.........150.........160.........170.........180... ......190.........
Predicted Secondary structure 



...



Query SS confidence 











































. . .















Query Sequence  FNMHLWLSPEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQ. . . LASTETQVGNELAPLK
Query Conservation   


 

 
      
  
   
   

     
  
       ...
  
            
Alig confidence  ....



















..

















...















Template Conservation  .... 

   
   

 

   
 ..                   


   
     

  
 
Template Sequence  . . . . FVFEDSNAWSLLRAIRRAFV. . LWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK
Template Known Secondary structure  ....
SSS..TS




Template Predicted Secondary structure  ....




..







Template SS confidence 






























































   421........430.........440 .........450.........460.........470.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions