Job Description P39172 Confidence 25.42% Date Thu Jan 5 11:58:20 GMT 2012 Rank 116 Aligned Residues 45 % Identity 9% Template c2cazB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:vacuolar protein sorting-associated protein PDBTitle: escrt-i core Resolution 3.6 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	K	D	F	E	A	Q	L	A	S	T	E	T	Q	V	G	N	E	L	A	P	L	K	G	K	G	Y	F	V	F	H	D	A	Y	G	Y	F	E	K	Q	F	G	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	T	Q	Y	T	N	T	V	D	K	L	L	K	Q	F	K	V	Y	L	N	S	Q	N	K	E	E	I	N	K	H	F	Q	S	I	E	A	F	C	D	T	Y	N	I	T
Template Known Secondary structure																						T	S	S	S								T		S								T	T
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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