Job Description P39172 Confidence 30.38% Date Thu Jan 5 11:58:20 GMT 2012 Rank 94 Aligned Residues 58 % Identity 10% Template c1mgpA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:hypothetical protein tm841; PDBTitle: hypothetical protein tm841 from thermotoga maritima reveals2 fatty acid binding function Resolution 2.00 Å

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		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		I	Q	P	G	A	Q	R	L	H	E	I	R	T	Q	L	V	E	Q	K	A	T	C	V	F	A	E	P	Q	F	R	P	.	.	.	.	.	A	V	V	E	S	V	A	R	G	T	S	V	R	M	G	T	L	D	P	L	G	T	N	I	K	L	G
Query Conservation																																	.	.	.	.	.
Alig confidence																																	.	.	.	.	.
Template Conservation
Template Sequence		S	Q	P	S	V	E	D	F	K	K	R	Y	L	K	Y	K	E	E	D	Y	D	V	V	L	V	L	T	L	S	S	K	L	S	G	T	Y	N	S	A	V	L	A	S	K	E	V	D	I	P	V	Y	V	V	D	T	L	L	A	S	G	A	I	P
Template Known Secondary structure																			T	T		S							S		T	T	T		S												S	S	S								S			G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions