Return to main results Retrieve Phyre Job Id

Job DescriptionP09147
Confidence100.00%DateThu Jan 5 11:01:57 GMT 2012
Rank21Aligned Residues312
% Identity18%Templated1rpna_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA
Query Conservation 











  

  

  
  
    
                   
  
  

 
                    
Alig confidence 





































.








































Template Conservation   










  

  

  
  
    
       .           
  
  

 
                    
Template Sequence  SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR. WRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA
Template Known Secondary structure  TTTSTT



SS


.TT
GGG

TT


S

Template Predicted Secondary structure 












.
















Template SS confidence 















































































   4.....10.........20.........30.........40. ........50.........60.........70.........80..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  GLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILT
Query Conservation                                                                                  
Alig confidence 















































































Template Conservation                                                                                  
Template Sequence  AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV
Template Known Secondary structure  S


TTST
TTSGGGG
S
SSSSB
TTS




S
Template Predicted Secondary structure 

































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  DLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLAD
Query Conservation                      
                                                           
Alig confidence 






.



















.......






















......















Template Conservation         .      
     
       .......                       ......                
Template Sequence  NYRESFG. LHASSGILFNHESPLRGIEF. . . . . . . VTRKVTDAVARIKLGKQQELRLG. . . . . . NVDAKRDWGFAGDYVE
Template Known Secondary structure 
.




TTS
TTS.......TTS
S
S......
TT

Template Predicted Secondary structure 
.



















.......








......









Template SS confidence 















































































   163...... 170.........180......... 190.........200.........210.. .......220........
 
   242.......250.........260.........270.........280........ .290.........300.........310.......
Predicted Secondary structure 


















....
















Query SS confidence 














































. . . .




























Query Sequence  GHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHF. . . . APRREGDLPAYWADASKADRELNWRVTRT
Query Conservation                                    
    
       ....             
  

   

  
   
Alig confidence 












....





























....




























Template Conservation               ....            
    
    
                        
  

   

  
   
Template Sequence  AMWLMLQQDKADD. . . . YVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTS
Template Known Secondary structure  SSS


....

S
TTT

GGGT
GGG

SS


B

B
T




S
Template Predicted Secondary structure 






....


































Template SS confidence 















































































   229230.........240. ........250.........260.........270.........280.........290.........300....
 
   318.320.........330..
Predicted Secondary structure 
Query SS confidence 














Query Sequence  LDEMAQDTWHWQSRH
Query Conservation 
 
 
     
    
Alig confidence 














Template Conservation 
 
 
   
      
Template Sequence  LDELIRMMVEADLRR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 














   305....310.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions