Return to main results Retrieve Phyre Job Id

Job DescriptionP09147
Confidence98.54%DateThu Jan 5 11:01:57 GMT 2012
Rank152Aligned Residues233
% Identity14%Templatec3imfA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short chain dehydrogenase; PDBTitle: 1.99 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor'
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.. ....
Predicted Secondary structure 























.....



Query SS confidence 






































































. . . . .



Query Sequence  RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH. . . . . AIDT
Query Conservation 











  

  

  
  
    
                   
  
  

 
           .....    
Alig confidence 














































.






















.....



Template Conservation   






 


 
 
  
   
  

   
           
    .        
                       
Template Sequence  VVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFP. GQILTVQXDVRNTDDIQKXIEQIDEKFGRIDI
Template Known Secondary structure  TTTTSTT
S


ST.T


TT
S


Template Predicted Secondary structure 













.












Template SS confidence 















































































   5....10.........20.........30.........40.........50. ........60.........70.........80...
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
Predicted Secondary structure 




















































Query SS confidence 















































































Query Sequence  VIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMV
Query Conservation                                                                                  
Alig confidence 















































































Template Conservation                                                      
   
              


 
    
Template Sequence  LINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAX
Template Known Secondary structure 








GGG

T




GGGGS

TT
Template Predicted Secondary structure 








































Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  EQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV
Query Conservation                           
                                                      
Alig confidence 












































................................


Template Conservation               



 
 

 
 
              
 

 ................................  
Template Sequence  TKTLAVEWGRKYGIRVNAIAPGPIERTGGAEXAKRTIQSVPLGRL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GTP
Template Known Secondary structure 



BSS





STTSTT
S
................................B
Template Predicted Secondary structure 























................................

Template SS confidence 















































































   164.....170.........180.........190.........200........ .210.
 
   237..240.........250.........260.......
Predicted Secondary structure 












Query SS confidence 






























Query Sequence  MDLADGHVVAMEKLANKPGVHIYNLGAGVGN
Query Conservation                                 
Alig confidence 






























Template Conservation 



  
 

 
  
  


  
  


   
Template Sequence  EEIAGLAYYLCSDEAAYINGTCXTXDGGQHL
Template Known Secondary structure  SGGGTT

S
STTTTS
Template Predicted Secondary structure 














Template SS confidence 






























   219220.........230.........240.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions