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Job DescriptionP09147
Confidence99.65%DateThu Jan 5 11:01:57 GMT 2012
Rank77Aligned Residues216
% Identity13%Templatec3h2sA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative nadh-flavin reductase; PDBTitle: crystal structure of the q03b84 protein from lactobacillus2 casei. northeast structural genomics consortium target3 lcr19.
Resolution1.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF
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Template Sequence  XKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR. . . . . . . . . LGATVATLVKEPLVLTEADLDSVDAVVDALS
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TTTSTT
S
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   1........10.........20.........30.........40 .........50.........60.........70.
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL
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Template Sequence  VPWGSGRGYLHLDFATHLVS. . . . . . . . . LLRNSDTLAVFILGSASLAXPGADHPXILDFPESAASQPWYDGALYQYYEY
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GGGSB
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   72.......80.........90. ........100.........110.........120.........130.........140..
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA
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Template Sequence  QFL. QXNANVNWIGISPSEAFPSGPATSYVAGKDTLLV. . . . . . . . . . . . . . . . . . . . . . . . . . . . GEDGQSHITTGNXA
Template Known Secondary structure  .TT
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   143.. ....150.........160.........170......... 180.........190...
 
   241........250.........260.....
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Query Sequence  DGHVVAMEKLANKPGVHIYNLGAGV
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Template Sequence  LAILDQLEHPT. . AIRDRIVVRDAD
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   194.....200.... .....210......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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