Job Description P09147 Confidence 99.61% Date Thu Jan 5 11:01:57 GMT 2012 Rank 80 Aligned Residues 212 % Identity 16% Template c3e8xA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nad-dependent epimerase/dehydratase; PDBTitle: putative nad-dependent epimerase/dehydratase from bacillus halodurans. Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	L	V	T	G	G	S	G	Y	I	G	S	H	T	C	V	Q	L	L	Q	N	G	H	D	V	I	I	L	D	N	L	C	N	S	K	R	S	V	L	P	V	I	E	R	L	G	G	K	H	P	T	F	V	E	G	D	I	R	N	E	A	L	M	T	E	I	L	H	D	H	A	I	D	T	V	I	H	F	A
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.
Template Sequence		R	V	L	V	V	G	A	N	G	K	V	A	R	Y	L	L	S	E	L	K	N	K	G	H	E	P	V	A	X	V	R	N	E	E	Q	G	P	E	L	R	E	.	.	.	.	.	.	.	.	R	G	A	S	D	I	V	V	A	N	L	E	E	D	F	S	H	A	F	A	S	I	D	A	V	V	F	A	A	G	S
Template Known Secondary structure							T	T	T	S													T	T								S	S	G	G	G							.	.	.	.	.	.	.	.	T	T		S							T	T	S			G	G	G	G	T	T		S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.									.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	K	A	V	G	E	S	V	Q	K	P	L	E	Y	Y	D	N	N	V	N	G	T	L	R	L	I	S	A	M	R	A	A	N	V	K	N	F	I	F	S	S	S	A	T	V	Y	G	D	Q	P	K	I	P	Y	V	E	S	F	P	T	G	T	P	Q	S	P	Y	G	K	S	K	L	M	V	E	Q	I	L	T
Query Conservation
Alig confidence									.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	H	T	G	A	D	.	.	.	.	.	.	K	T	I	L	I	D	L	W	G	A	I	K	T	I	Q	E	A	E	K	R	G	I	K	R	F	I	X	V	S	S	V	G	T	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	Q	G	P	X	N	X	R	H	Y	L	V	A	K	R	L	A
Template Known Secondary structure			T	T	S				.	.	.	.	.	.					T	T	T														T										T	T		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	S		G	G	G
Template Predicted Secondary structure									.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.															.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	Q	K	A	Q	P	D	W	S	I	A	L	L	R	Y	F	N	P	V	G	A	H	P	S	G	D	M	G	E	D	P	Q	G	I	P	N	N	L	M	P	Y	I	A	Q	V	A	V	G	R	R	D	S	L	A	I	F	G	N	D	Y	P	T	E	D	G	T	G	V	R	D	Y	I	H	V	M	D	L	A	D
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	E	L	K	R	S	S	L	D	Y	T	I	V	R	P	G	P	L	S	N	E	E	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	V	T	V	S	P	H	F	S	E	I	T	R	S	I	T	R	H	D	V	A	K
Template Known Secondary structure								S	S	S									S				S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						S	S		S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																																	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	V	V	A	M	E	K	L	A	N	K	P	G	V	H	I	Y	N	L	G	A	G	V	G	N	S	V	L	D	V	V	N	A	F
Query Conservation
Alig confidence											.	.													.
Template Conservation											.	.													.
Template Sequence		V	I	A	E	L	V	D	Q	Q	.	.	H	T	I	G	K	T	F	E	V	L	N	G	.	D	T	P	I	A	K	V	V	E	Q	L
Template Known Secondary structure							T	T		G	.	.	G	G	T	T									.										T
Template Predicted Secondary structure											.	.													.
Template SS confidence
		182	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions