Phyre 2 alignment of P09147 with c3c1oA

Job Description P09147
Confidence 99.90% Date Thu Jan 5 11:01:57 GMT 2012

Rank 63 Aligned Residues 275

% Identity 13% Template c3c1oA_

PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:eugenol synthase; PDBTitle: the multiple phenylpropene synthases in both clarkia2 breweri and petunia hybrida represent two distinct lineages

Resolution 1.80 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure			.																																						.	.
Query SS confidence			.																																						.	.
Query Sequence	M	R	.	V	L	V	T	G	G	S	G	Y	I	G	S	H	T	C	V	Q	L	L	Q	N	G	H	D	V	I	I	L	D	N	L	C	N	S	K	R	S	.	.	V	L	P	V	I	E	R	L	G	G	K	H	P	T	F	V	E	G	D	I	R	N	E	A	L	M	T	E	I	L	H	D	H	A	I	D	T	V
Query Conservation			.																																						.	.
Alig confidence			.																																						.	.
Template Conservation
Template Sequence	M	E	K	I	I	I	Y	G	G	T	G	Y	I	G	K	F	M	V	R	A	S	L	S	F	S	H	P	T	F	I	Y	A	R	P	L	T	P	D	S	T	P	S	S	V	Q	L	R	E	E	F	R	S	M	G	V	T	I	I	E	G	E	M	E	E	H	E	K	M	V	S	V	L	K	Q	V	D	I	V	I	S
Template Known Secondary structure								T	T	T	S	T	T											T	T												T	T															T	T								T	T										T	T		S
Template Predicted Secondary structure
Template SS confidence
	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

	78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	H	F	A	G	L	K	A	V	G	E	S	V	Q	K	P	L	E	Y	Y	D	N	N	V	N	G	T	L	R	L	I	S	A	M	R	A	A	N	V	K	N	F	I	F	S	S	S	A	T	V	Y	G	D	Q	P	K	I	P	Y	V	E	S	F	P	T	G	T	P	Q	S	P	Y	G	K	S	K	L	M	V	E
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	A	L	P	F	P	M	I	S	S	Q	I	H	I	I	N	A	I	K	A	A	G	N	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	L	P	S	D	F	G	C	E	E	D	R	I	K	P	L	P	P	F	E	S	V	L	E	K	K	R	I	I	R
Template Known Secondary structure				G	G	G	S	G	G	G															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S			S	S		G	G	G
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																										.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

	158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Q	I	L	T	D	L	Q	K	A	Q	P	D	W	S	I	A	L	L	R	Y	F	N	P	V	G	A	H	P	S	G	D	M	G	E	D	P	Q	G	I	P	N	N	L	M	P	Y	I	A	Q	V	A	V	G	R	R	D	S	L	A	I	F	G	N	D	Y	P	T	E	D	G	T	G	V	R	D	Y	I	H	V	M
Query Conservation
Alig confidence							.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	R	A	I	E	A	A	.	.	.	.	.	A	L	P	Y	T	Y	V	S	A	N	C	F	G	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	N	Y	L	L	H	P	S	P	H	P	N	R	N	D	D	I	V	I	Y	G	T	G	E	T	K	F	V	L	N	Y	E	E
Template Known Secondary structure							.	.	.	.	.	T			B												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S			T	T	S						T	T	S
Template Predicted Secondary structure							.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	136	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.	.	.																					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

	238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	D	L	A	D	G	H	V	V	A	M	E	K	L	A	N	K	P	G	V	H	I	Y	N	L	G	A	G	V	G	N	S	V	L	D	V	V	N	A	F	S	K	A	C	G	K	P	V	N	Y	H	F	A	P	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence	D	I	A	K	Y	T	I	K	V	A	C	D	P	.	R	C	C	N	R	I	V	I	Y	R	P	P	K	N	I	I	S	Q	N	E	L	I	S	L	W	E	A	K	S	G	L	S	F	K	K	V	H	M	P	D	E	Q	L	V	R	L	S	Q	E	L	P	Q	P	Q	N	I	P	V	S	I	L	H	S	I	F	V
Template Known Secondary structure													G	.	G	G	T	T								G	G	G																T	S																			S		T	T	T												T
Template Predicted Secondary structure														.
Template SS confidence
	191	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

			293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure	.	.																			.
Query SS confidence	.	.																			.
Query Sequence	.	.	E	G	D	L	P	A	Y	W	A	D	A	S	K	A	D	R	E	L	.	N	W	R	V	T	R	T	L	D	E	M	A	Q	D	T	W	H
Query Conservation	.	.																			.
Alig confidence	.	.																			.						.
Template Conservation																											.
Template Sequence	K	G	D	L	M	S	Y	E	M	R	K	D	D	I	E	A	S	N	L	Y	P	E	L	E	F	T	.	S	I	D	G	L	L	D	L	F	I	S
Template Known Secondary structure	T		T	T	T	S	S				S	S				G	G	G	T		T	T					.											T
Template Predicted Secondary structure																											.
Template SS confidence
	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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