Job Description P09147 Confidence 100.00% Date Thu Jan 5 11:01:57 GMT 2012 Rank 25 Aligned Residues 296 % Identity 20% Template c2pzlB_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:putative nucleotide sugar epimerase/ dehydratase; PDBTitle: crystal structure of the bordetella bronchiseptica enzyme2 wbmg in complex with nad and udp Resolution 2.39 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	L	V	T	G	G	S	G	Y	I	G	S	H	T	C	V	Q	L	L	Q	N	G	H	D	V	I	I	L	D	N	L	C	N	S	K	R	S	V	L	P	V	I	E	R	L	G	G	K	H	P	T	F	V	E	G	D	I	R	N	E	A	L	M	T	E	I	L	H	D	H	A	I	D	T	V	I	H	F
Query Conservation
Alig confidence																																												.	.	.	.	.
Template Conservation																																												.	.	.	.	.
Template Sequence		M	R	I	L	I	T	G	G	A	G	C	L	G	S	N	L	I	E	H	W	L	P	Q	G	H	E	I	L	V	I	D	N	F	A	T	G	K	R	E	V	L	P	.	.	.	.	.	P	V	A	G	L	S	V	I	E	G	S	V	T	D	A	G	L	L	E	R	A	F	D	S	F	K	P	T	H	V	V	H	S
Template Known Secondary structure								T	T	T	S											G	G	G	T										S	S	S		G	G	G	S		.	.	.	.	.	S		T	T								T	T															S
Template Predicted Secondary structure																																												.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	K	A	V	G	E	S	V	Q	K	P	L	E	Y	Y	D	N	N	V	N	G	T	L	R	L	I	S	A	M	R	A	A	N	V	K	N	F	I	F	S	S	S	A	T	V	Y	G	D	Q	P	K	I	P	Y	V	E	S	F	P	T	G	T	P	Q	S	P	Y	G	K	S	K	L	M	V	E	Q	I	L
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.
Template Sequence		A	A	A	Y	K	D	P	D	D	W	A	E	D	A	A	T	N	V	Q	G	S	I	N	V	A	K	A	A	S	K	.	.	.	.	.	.	.	.	.	A	G	V	K	R	L	L	N	F	Q	T	A	L	C	Y	G	R	P	A	T	V	P	I	P	I	D	S	P	T	A	P	F	T	S	Y	G	I	S	K	T	A
Template Known Secondary structure						S		T	T										T													.	.	.	.	.	.	.	.	.	T	T		S								G	G	G	G		S		S	S	S	S	B		T	T	S						S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.										.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	L	Q	K	A	Q	P	D	W	S	I	A	L	L	R	Y	F	N	P	V	G	A	H	P	S	G	D	M	G	E	D	P	Q	G	I	P	N	N	L	M	P	Y	I	A	Q	V	A	V	G	R	R	D	S	L	A	I	F	G	N	D	Y	P	T	E	D	G	T	G	V	R	D	Y	I	H	V	M	D	L	A
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	A	F	L	M	M	S	D	V	P	V	V	S	L	R	L	A	N	V	T	G	P	R	L	A	I	G	P	I	P	T	F	Y	K	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	G	Q	K	C	F	C	S	D	T	V	R	D	F	L	D	M	S	D	F	L
Template Known Secondary structure							T	T		S	S													T	T			S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T							S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	H	V	V	A	M	E	K	L	A	N	K	P	G	V	H	I	Y	N	L	G	A	G	V	G	N	S	V	L	D	V	V	N	A	F	S	K	A	C	G	K	P	V	N	Y	H	F	A	P	R	R	E	G	D	L	P	A	Y	W	A	D	A	S	K	A	D	R	E	L	N	W	R	V	T	R	T	L	D	E
Query Conservation
Alig confidence																.	.	.																															.	.
Template Conservation																.	.	.																															.	.
Template Sequence		A	I	A	D	L	S	L	Q	E	G	R	P	T	G	.	.	.	V	F	N	V	S	T	G	E	G	H	S	I	K	E	V	F	D	V	V	L	D	Y	V	G	A	P	V	P	V	V	.	.	A	P	G	A	D	D	V	P	S	V	V	L	D	P	S	K	T	E	T	E	F	G	W	K	A	K	V	D	F	K	D
Template Known Secondary structure								T	S	T	T					.	.	.					S		S																	T							.	.				T	T	S		S	B			B															S
Template Predicted Secondary structure																.	.	.																															.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	Q	D	T	W	H	W	Q	S	R	H	P	Q	G	Y	P	D
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		T	I	T	G	Q	L	A	W	Y	D	K	Y	.	.	G	V	T	D
Template Known Secondary structure														.	.		S		S
Template Predicted Secondary structure														.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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